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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12988_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
Transcript
Level		FPKM:3.41 TPM:3.43
ORF EntryO_BomoSK12542_complete:A_BomoSK_comp12988_c0_seq3
Sequence
(Nucleotide)
TTATCTAGTTACAATTGTTGATCGGAGCTTTACCCTGTTAGGCAGCTACCATAGGCTAAC
TACTGCACTACCGACCCATTCGACTGAGGATCTATCCATCATTTACCTGGAATGGACTAA
TGACAGGAACAGTTAGAATGGTGCCTATCTGTGTGAGCTCAGAAAACTTCCTATCTTAAT
TATACATACTTATAGTAATGCTTATGGTAAGCTGTCAGTGGTTTATGTATATAAATTGAT
AATGGGGATTTAAACATAGTACCAACAGTATATCACTTATATTTGTATAATCAGTATCAA
CATGATAAGGATTTATCGTACAAAAATCATATGAGCCTTTTTAATACTTTTGATAAATAG
TGAACTCACAGTAATTACTTGTATTGTGCATGTACATTAAAAAATCAGATCATATACACT
AAAAAAATTCAGTTTGGCGACTATAGTAATCTCAACTTCAATTAAAAAAAAAAATTGTTG
ATAAAACTGAAGTTTTATGTGGACAATCTTTAATAGACTAATATTGTATAATTCTCTACG
TTTAAATTACACTTTTCTTCACTTTAGGAAGTCTTCGACAATATTTTAATTAAATTAAAC
TTTTTTATCTTTCTTCACTTTTGATTCAGGGGCATTAGGGTTTATCCCTTTATAAAACTC
TTTGAGCAACATCATAGCTTCATCTGCCAACAAGTTTCCATTTAAAATATAATTTTGTTC
ATAAAAGTTACTGACATCTAAAACGGTATTTCCGCCAAACCTGTCATTGGGGCAACCATA
TACCACCTCACGGATGTTTAGATTGTTGAGCGCTGCCGCGCACATTATGCACGGTTCAAC
GGTCACATACACAATTACGTTCTTGAAATATAGCTTGTAATCGATGTTGTTTAATCTACA
GTATTCTAGAATTTGATCAATGCAGTTGATTTCCGCATGTCTAGTTGGGTTGTGTGTGGC
GTTTACACTGTTTTTTGATTCTGCAATAATTTGTCCGTTAACTGTGAATACACAACCAAC
AGGCACCTCTTTAAGAGCCAGAGCTTCAGCTGCTAATTCAAGACACCTTCTCATATGATC
AACCATATTCGACTTAATCTTTTAACGATACAATTTCAAGCAAATCCTTGATAAAAGTGC
AATAAATTGTTTTCTTTTAAACAGTGAAGTGCTTTGTCGTCCCAGTTATTATTGTTTACA
GCTCTTGGACTTGGATGTGGCATGTATATTACCTGTATTTTATTTCGAAATGAATACTTG
TCCAGAATTTTTTGTGCGCGTAATTCGCAAAATTTTCCGATCGCCACTATGATGTGTACA
TCATAAAGTTCGAGAACTTTTTTGAATATTGGATCACATATGTGATATAATGAATCTATT
TCTGCGGCCTTGAAATCACCAGGAGTCAAATTGCATCCATTATTCTTCATCCATTGTTCT
GGTAAATAATTATATACAAAACTAGATTCAAAAAAATTGTTTGGTTCTCCACATAAATTC
TTGAACAATCCCCAGAATCGTTTCCCACTTACTTCAGTTCTTTTACAATCAAATCCATTG
ACTGGTCTAGACTTAATTTCCAGTGGAGGTTTGCCAACAGAGCCATTTATACCCAGCCAA
TCTCTGACTGAAGAAATTTCACCAAATGGAACCTGCAAGGAACCAGATGCTACCCTAGCT
CTACTTTAATCTACTTTTTTGTTGTACTATCCTTTTCAGTGGTCGTGGTCGTCAGTTAGT
ACCATTGCAGACGTTAGGCGCCTCACGAGCAATCGCCACTACTCCCGGTTTGTGATGAGC
CTAATTCATAAAAATATTAAGATGATGAATATAACAAAGTAGTGTACAGAATAGTACAGA
TTCTGTGATTTTTTAAAAACACTAACATTTTCA
(1893 bp)

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