SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12987_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		seryl-tRNA_synthetase_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0070062 C extracellular exosome
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
Transcript
Level		FPKM:18.38 TPM:18.49
ORF EntryO_BomoSK12538_complete:A_BomoSK_comp12987_c0_seq1
Sequence
(Nucleotide)
GCCGAAAAGTGTGAGACGAGAGACGACGTGTTTGATAATTTTAAAGAATATTTCTACATA
TGTAATTTATCTGAGTTAAATTAATAACGTCAACATGGTCCTCGACTTAGACTTATTTCG
TGCCGATAAAGACGGTAATCCAGATAAAATTCGAGAAAATCAGAAGAAGAGATTTAAAGA
TGTTGCCCTTGTGGATGCAGTCGTCGAGCAAGACACCTTGTGGAGGAAATTGCGCCACGA
AGCTGACAATTTCAATAAACTGAAGAATGTATGTAGCAAAGAAATTGGTTTGAAAATGAA
GAACAAGGAACCCAGTGGCTCTGAAGACGAACCCGTCCCCTCGGAGATCGCCAATAACCT
GGTAAACCTCACCGGCGATAACTTGAAGCCTCTCACAGTAAATCAAATAAAAAAAGTAAG
AGTATTAATAGATAATGCAATATCAAAGAATGATGAAGGGTTATTGGCTGCTGAGAAAGC
GCGTTCCGCTGCACTCAGGGAAGTTGGAAATCATCTGCATGAGTCTGTACCAGTTGATGA
TGATGAAGACCATAACTTGGTAGAAAGGACAGACGGAGACTGCGGCTTTAGAAAAAAGTA
CTCTCATGTGGATCTGATCTGCATGATTGATGGAATGGATGGAGAGAGGGGATCAGCTGT
AGCAGGTGGTCGTGGTTATTATCTGAAAGGTCCTGCAGTATTCCTAGAACAAGCCCTCGT
TCAACTTTCTCTAAGAATGTTACTTGAGAAAGGATATACGCCCTTGTACACACCATTCTT
CATGCGAAAAGAGGTTATGCAAGAGGTAGCACAACTAGCTCAATTTGACGAAGAACTGTA
CAAAGTCATAGGGAAAGGTTCTGAAAACAAGGGCGACACTGTTGTCGAAGAGAAATACCT
TATCGCTACATCAGAACAGCCCATAGCTGCTTTCCACAGGGATGAATGGCTTCCAGAATC
ATCTCTTCCCATCAAATATGCGGGACTCTCCACATGCTTCAGACAAGAGGTTGGATCTCA
TGGACGTGACACGCGTGGTATCTTTCGAGTACATCAATTTGAAAAGGTGGAACAATTTGT
TCTAACATCTCCTCATGATAACGCATCTTGGCAAATGATGGACGAAATGATAAACAATGC
TGAAGAGTTCTGCAAAGCACTAGGACTACCGTACCGTGTCGTGAACATCGTGTCTGGAGC
TCTAAACCATGCAGCTTCCAAGAAGCTAGACTTGGAGGCCTGGTTCCCAGGATCCGGTGC
GTTCAGGGAACTTGTCTCTTGTAGTAACTGTCTGGAGTACCAAGCCAGAAGATTGCTTGT
AAGGTACGGTCAGACGAAAAAGATGAACGCTGCCACTGAATACGTGCACATGCTGAACGC
GACCATGTGCGCCACCACCAGGGTCATTTGCGCCATACTCGAGGTACACCAGACAGAGGA
CGGCATCAAGGTACCGGAAATCCTCAAACCTTGGCTTCCCAAGCAGTATCAAGAATTAAT
ACCGTTCGTGAAACCCGCACCCATTGACGTGGAGGCGGCCGCTGCAGCCAAAAAAGGAAA
GAAACAAGAAAAAAAATGAAAACCAATAAAAAAAGTTTCATTCCAAGCAAAAAGCTTCAT
ATTTATTAAACTTGCTAAGCTTCACATTTTTTTTATCAAATGGAATAAATTAATTATTTC
GTTTGTTCTTATTTTATTTCATTACATCGGTTATTTAACCCGCATCTTTCCTTTATCAAT
TTAAATTTAGGTTTATGACCCATGTAGATAATTATAAATGTAAATAATAGATACTGTGCT
CTCTAATATCTCAAAGCATGTTTGAACAGTCGTTTGTTTCATTATATTTGTACAGTTAAT
TTTCCATTTCTGATATCAAATAGAAGATTCAAGAGTTTAATTCGGTACTAAGTATGAATA
GACAAGCTCACAGTCCAGAAAAGATTGGGCGGTTTATCTATTGGCACCACAATACCCTCC
AGTTTGAGGCAAGATTGGAGTATCAATTGCATTAA
(2015 bp)

- SilkBase 1999-2023 -