SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12981_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup214_isoform_X2_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:6.71 TPM:6.74
ORF EntryO_BomoSK12509_complete:A_BomoSK_comp12981_c0_seq3
Sequence
(Nucleotide)
CGACACGATTATAAAACTCACTGACGTAAACATCGGATAATCATACATAATTATTTACTA
TTGCAAATCAGACTAAAGCTGCTTCCCTACTTTCGTTTGATGGGTAGATTTCGTTTCTCG
CGTAGCACTCTTTAGCCGCGCCAGCCAGTGAACGATGGAGACGTATTGAAACTTGGAGCT
TGTTGCTGTTGTTGCTGACCAGATTGCTGAGCTAGATTACCGAACGTGAGGGTGTTCTGC
GTCGCTAAATTCTCGAAAGTCGAGTTCGACTGTGTAGACCCGAAACCTGATATAGGACTG
GCCATTCCCCCAAACATTTTCCCGGGGGAGGTGTTCCCGAAGGCCGGAGTGCCGCCGAAC
ACGCTTCCAGAACCGAACGAAGCCGGCGCTCCGAATCCGCTGTTCGGGCTCTTGTTGAAT
CCACCGAAAGACCCAAAGCCACTACCCGTAGGAGAACCAAAACCAGCAGACTGACCGAAT
GTTGGCTTAGAACCGAATGCAGCAGGGCTACCAAAGCCGGGAGCCGCTTGCTGTTGCGGA
GATCCGAAAACTGAAGGCTTAGTTTCGGCGCTACCGAATGGCGAAGTCTGTTGGGTGCCA
CCGAAGGCTTGGCCGGACTGAGGCGAGCTGAAGCTACCACCGGAACTGTTCCCAAATATC
GACGAGCCCTGTGTTGTTGTCTGTTGACCAAATCCAGTTGTGCCAAAGCCAGTGTTGCCA
GCGGCGTTACCGGATCCCCACAAATTCGTAGCGGGTTTATCTCCAAACGTAGTTCTACTG
CCGAATATCGAAGACGCACTAGAATTTGACTGACCAAAGGTTGTACTGCCTCCGAAAACA
TTAGTACCGCTGCTACCGAAAATAGACCCCGACGACCCTCCAAATATATTCCCGCCGGCG
GTCGGAGACGCAGCGCTTGTAGTCGAGATACTTGCGGCTGCAAATAAATTAGATTCACCG
CCTCCAAACAGAGAACCGCTCTGGGCCGCCGTCGTCGGAGTTCCGAATAACGATGCTTGA
GTTGTAGACGTCGGAGTACCGAATATAGACGCCTGCGTCGTTTGCGTGTTACTTCCGAAC
ACAGATGTTTGAGCTGGCTGGGTGGAGCTACCAAACACTGAGGGCTGAGTGACAGCGGGG
GTCCCGAACACGGAGGCCTTGTTTTGCGACGGAGTCCCAAACACAGAGGCTTGACTCGTC
TGAGTCGGACTACCGAACAAGGACGGTTGAGTCGTTTGGGCGCCGAAAACGGACGCCGAA
GTCGTTGGCGTCGCAGTACCAAACAACGATGTTTGTGTTGTTTGGCTCGGCGATCCAAAT
GCCGCAGCCGGCGCAGCCGAGGTTGGCGTTCCAAACACCGACGCTTGGGTCGAAGGTTGG
CCAAACACTGACGACTGATTCGCCGCAGCTCCAAATATGGACGAGGCTTGTGTGTCTGAT
GCAGCGCTACCGAATACGCTTTGAGTCGTTGTAGTCGCAGTCCCGAATAGAGATGGGGCG
CTTGTGGTAGGCGTGAACACACTCGCAGTTGTCGTGGGTGTGCCGAAAGCTGAAGCTTGG
GTTGTGACTGCGCTAGTTCCGAATATCGAAGATGCAGTTGTCGGGCTAAGTGTTGACGAC
TGTGTGGTCGCGGACGCCGAAAATACCGATGATGTTGCTGAGGCAAAGGCAACAGTTGAA
GACGTTGTGGCCGCCGCAGTTGAGGTCGTTGTTGCTGCCATAGTTGAGGTCGCTGTCACA
CTCGCGCTAGGTACTGCGGTCGATACAGGTACAGGCGTTCCGAATACTGATGTGACCGGT
TTCGGTGCGCTAAGCACCAATGGTTTTGGTGACTCACTGGTCGTGGCTGGTGGTGTCCCA
AATATGGAACCCGTCGCAGATCCTCCAAATATAGAATTTTGTGTTGTAACACTAAAAGGC
GTAGCTGTACTGAATATTGAGCTAGATGCTGTAGTTTTTGGTTGTGATGCGACGGCTGTT
CCAAAAATGGAGACAGCAGAAGTCGTCGCTGGTGATGCAGTGTTAGTTTCTGTTGAAAGT
TCATCCTTTGTAGGCACATCAGGTTTCGGCTGGATCGGTGAAGTAGTTGAAGCGGCTATT
AGCTTGGAAGATTCGTTCACGGCACTGAATATCGAAGTTGTACTAGATGTGGCTGGAGTA
TCAGGCTGCTTGGCTGTTTCAGATTTCATTTCTAGCTTAATCGGAATGGTCTGCGTTGTT
AGTACATTCGAACTTGTTGCAACTGGTTGAACTACCGGTATCAGCGGTGACGGTTTAACT
ATTTGCGGGACAAACGTTTTAGGAACATTTTCTTTTTCGGCAATCTTTTGAACGACTTTA
GATTCATCGTTGACTTTGGCCGCTATGTTCTCTTTTGGTTTCTCTATCGCGTTTTCATTG
TGCTTCACGACGGCTCTCACTTCTGTATTCGGTACTTCTTGATGACTTTTCAAAACGTCC
GGTACATTAGAGATGGTGGGTGCAAATGGGGTAGTTGGTTTCATACCAAACAGGTTGGTA
ATAGGTTTATTAACCTTCTTGCTGTCGGCTGGTTTTGCTGCACCTTCAGGTTCGCCGGTT
TCACTGGATTTCACAGAAGCGACAGTCACAGGTTTGGGTTCAAAAACCACAGGCTGTGTT
TGAGCACTCGAAGACAAGCTATTTTGACTAAGTCCAAGATTCGCTGTCGACTTATTGGCC
GGCACTAACGATTCCGCAGTAGCTGGTTGATTTGAGAACGGAGAAATAGGTGAGCATATT
TTCTGTCCCATGAATTGCTTCAAGTCATTGTTAGGCGTTTGATTTGAAGACATATTAGGT
ACAGGCGATGTGTATGAGAATGGGGGTGGTGCATAGCAAACTCCAGTAAAATTAAAAGAT
TCAACAGGAATTCTAACTCGGGGTTCTTCGGGCTTCGGTTCGGTAAACAATGTTCTAGTG
ACGTTTTGAAGTCCCGGTACTGAGGGTTTGCTCTGAATGGGCGAGAACGGCGCTACTGTC
TCGGTAAATTGTTTTGTTTCCATTTTAGGTTCAGCTTTAATAACATCTTTAAGGGGCACG
CTTTCTTCAACAGGTTCAATTTTAACTTGCACTT
(3094 bp)

- SilkBase 1999-2023 -