SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12970_c0_seq4
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		putative_Transcription_initiation_factor_IIF_subunit_beta_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000991 F obsolete transcription factor activity, core RNA polymerase II binding
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:10.97 TPM:11.04
ORF EntryO_BomoSK12469_complete:A_BomoSK_comp12970_c0_seq4
Sequence
(Nucleotide)
TATACACTTAATATTTTCGAGAGCTGTCACTTATGTAGGTCTTTTGTGGAAGTGCAAGTA
AATTTTCTAAGATTTAGTTATAGTTAAAGGAAATCTTTACGACTTTAGTACTTTTAAAGG
CCGTTAAAATAGTGTCCGCTATCGACTGCTAATAGATTTTATATTCCACAACAATGACCG
AATTGGACTTATCAAATACTGGTAGAGGAGTATGGTTGGTAAAAGTACCTAAATATATAG
CAAACAAATGGGAAAAAGCTCCTGGAAACATTGAGGTAGGAAAACTAAAGATCTCCAGAG
TACCAGGAACGAGAGCTAAAGTGCAGTTATCCTTGTCAGAAGCAGTGCTATGTTTAAAGG
ACCCTGGTGAACAAAGCATACCAAAAGAACATAAGCTTGATGTTTCAAACGTTAATACTC
AATCTCTAGGTGTATTTTCGCATATTGCCCCGACAAATACGGACTCTGTAGTACCAGAGA
CAGAAAACCTTTACATGGAGGGTAGGATTGTACAGAAATTGGAATGCAGACCAAATGATG
ATGTGACATACTATAAGCTTAAATCTGAATCAATAAAGAAAGCATCCATGCCTCAGCGAC
AAGTGCAACAGCTTGACAGGATTGTTCAGAACTTCAAACCAGTATCTGACCATCCACATA
ATATTGACTACCAAGAAAGGAAGAAGGCTGAAGGGAAAAAGGCTCGTGATGATAAAGAAG
CAGTGCTCAATATGCTGTTTGCAGCATTTGAGAAACATCAGTATTACAATATTAAGGATC
TTCAAAAGATCACCAGACAGCCAATAGTATATTTGAAAGAAATTCTGAAAGAGGTCTGTA
ATTACAATTTAAGAAATCCTCACAAGAATATGTGGGAGTTAAAACCAGAATATAGGCATT
ACAAACAAGATGTTCCTGTTGAAACAAAGGAGGATAAGAACAGTAATTCTGATACTGAAT
AGACTGAAATTTGTATTAATTATACAAATATACATAAATATGGATGTCAGAGAATCCTCG
ACAGAAGCAAAGTTTTTATGTATTTTTCAATAACTTATATTATAAGATGTGTTAAGAATG
TGAATTTTTCATTATTACCTGTAATATTATGTGATCAATCTTGGGTGTATATTCGAAATA
ATGTAAAGATTTTAA
(1155 bp)

- SilkBase 1999-2023 -