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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12968_c0_seq1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_talin-1_isoform_X7_[Papilio_xuthus]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:19.30 TPM:19.41
ORF EntryO_BomoSK12457_3prime_partial:A_BomoSK_comp12968_c0_seq1
Sequence
(Nucleotide)
TTTTAATCGAGTAAATTGGTGGAAATTGAATTGCCACTGCAGTGAAGGTGGCCGCAGGTA
TTCACTGACTGCTGTCTAAAAAGTCCAGCAGATGGCGCAGTAGTACTCGTGATGTTGTTA
CACACTGTAGGGGCGTATAAGTGCTTGAGTGAAATTTTTCGTGTTTTGTGGTAAATCAAG
TGCTAAATACAAACTAGAAACGGTACAGAAGGTGTAATGTAAAGAAGACAGCTAACAACA
TTGTATATACCTAGTGCCTTAATACAGCTAAACTTGTGCCTTTAAAGAAATATTTATTAG
AAGAATATATCCAAAGAAACGAACGAAGCGAACAACGATACGATACCGAACGAGGACTCA
TCATTGGAAGCACCGTCGCTCTCGTGACGGATCCGCGACCGAGTCGAGAGGGCTCTGCAG
GATAACTGGAGACGACTGACCACAACCCGACCCGGCTCATCTCCAAGTCGTCCTCGCCTG
AGATCGTTCAGTAAAGAGCATCAGCCACAGAGGCGAGGCAGCGCGCCTTGCCCGGACCTC
GACTACAGACCCGATCATACTGCTACAATACACAAGACTCGGTCTCTGGTGAAAATGGCG
ACCCTATCGTTGAAGATCTCCATTGACGGAGGCAAGGTCGTGAAGACAATACAGTTCGAA
CCCTCCACCACAGTGTACGACGCGTGCCGCATCATCAGGGAAAAGATCTTGGAGGCCACA
GCGGGAGACCCAAAAGAGTATGGCCTCTTCTTGGCTTCGGAGGAAGACAACAAGAAGGGG
ATATGGCTGGAAGCGTCCCGAAGTCTTGACTATTACATGCTAAGGAACGGAGACCTTCTG
GAGTACAACAAAAAGACCAGGAATCTCAGAGTCAGGATGCTTGATGGTACTGTGAAAACC
CTGCTGGTGGACGACAGTCAGATCGTCGCGAACCTCATGGTAGTGATTTGCACCAAGATC
GGGATCACCAACTATGACGAATACGGCCTGGTTCGGGAAGAGCAAAAGGAGGAACCGGAT
CCCTGCGAGAAGCCAAACTACGGGACTCTGACCCTGAAGCGTAAGCACCAGGAGAAGGAA
CGAGACGCCAAGATGGAACAGCTCAGGAAGAAACTCAGAACTGATGACGAAGTGAACTGG
GTGGAGGGGTCGCTGACCCTTCGTGAGCAGGGCGTGGAGGCGGGCGAGACCTTACTGCTG
CGCCGCAAGCTGTTCTACTCGGACAGGAACGTGGACTCGCGCGACCCCGTGCAGCTCACC
CTGCTGTACGTGCAGGCCAGGGACGCCATCCTGGCCGGCGCGCACCCCACCACGCAGGAG
AAAGCTTGCGAGTTTGCCGGGATACAGTGCCAGATACAGTTCGGGGACCACCGGGAGGAC
AAGCACACGCCAGGATTCCTCGATTTAAAAGAGTTCCTGCCGGCCTCGTACGTGAAGGTG
AAAGGCATCGAGAAGAAGGTGTTCAGGGAGCACAAGAAGCACGTCGGGCTCAGCGAGCTG
GACGCCAAGGTGCTCTACACCAAGACGGCGCGGGACCTCAAGACCTACGGAGTCGCCTTC
TTCCTCGTCAAGGAAAAAATGAAAGGCAAAAACAAACTGGTACCGCGTCTTCTGGGAGTC
ACGAAGGACTCCGTGCTCAGACTGGACGAGAAGACGAAGGAGATCCTGCAGACGTGGCCG
CTCACCACCGTGAGGAGGTGGTGCGCCAGCCCCAACACTTTCACCCTCGACTTTGGCGAT
TACAGCGACCAGTACTACTCGGTGCAGACCACGGAGGCGGAGCAGATCCTGCAGGTCATC
GCCGGCTACATCGACATCATCGTGCGGAAGCAGCGGGCCAAGGAGCACCTCGGCATCGAG
GGAGACGAGGGCTCCGCCATGCTCGAGGACTCCGTGTCGCCCTCCAAAGCGAACATCATC
CAGCACGACACGTTCAAGTCCGGTAAAGTGAACACCGAGTCCGTCGCCAAGCCGGCGGTG
CACCGGCCCGGAGCTGAAGGTGCGAAGCCGTTCGCCGTGGGGCACGTGACGGGCGCGCAG
CTGACCACGGTCTCCGGGCAGGTGGTGACGGGGCACGCGCCGCCCGCCGCGTCGCAGGTA
CAGCAGACCAAGGTGACCTCGATACTCACGGAACCTCAGCGGGCCCTGTTGACCACCATC
ACCAGCGGCAGGGAGATCATCAAGCAGACCGAAGAAGGACTCAGCAGGACAACCCTGCCC
GAACTGGGAGGTGACGCATCCTCAGTGAAATGGAAGCAGTCGACCCTGGACACCAACAAG
CAGGCCGTCAGCTCGCAGATCGCGGCCATGAACGCGGCCACGGCGCAGGTCGTCACCCTC
ACCGCCGGTCCAACCGAAGAGGTAGACCACACAGCAGTGGGTGCCGCCATCACGACCATC
ACCAGCAACCTGCCGGAAGTGACGCGCGGGGTCAGGATGATCGCAGCCCTCATGGACGAC
TCCGACAACGGAGACAGACTGTTGGACGCCACCAGGAAACTTTGCACCGCGTTCACCGAC
CTGCTGAAGGCGGCCGAGCCGGAAACGAAGGAGCCGCGCCAGAACCTGTTGAACGCAGCC
TCCAGGGTCGGGGAGGCGTCCACGTCCGTGCTGTACACCATCGGGGAGGAGACCGAGGAG
GACAAGCAGACGCAGGACATCCTTCTGTCTCTCGCCAAAGCCGTAGCCAACACGACGGCA
GCTTTAGTGTTGAAAGCGAAGAACGTGGCGGCCCAGTGCCGGGACGACCAGCAGCTGCAG
AACAACATCATAGCCGCGGCCACGCACTGCGCCCTGGCCACCAGCCAGCTCGTGGCCTGC
GCCAAGGTGGTGGCGCCCACCCTGCACAGCGCGGCGTGTCGCGAGCAGCTGACGAGCGCG
GCGCGGCAAGTGGCGCAGGCCGTGG
(2905 bp)

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