SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12931_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_peptidylprolyl_isomerase_domain_and_WD_repeat-containing_protein_1-like_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0008380 P RNA splicing
GO:0016853 F isomerase activity
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.22 TPM:9.27
ORF EntryO_BomoSK12364_5prime_partial:A_BomoSK_comp12931_c0_seq2
Sequence
(Nucleotide)
AGCGACAGGATCCTGATGTCGTCGTAGGGCTTGTCGGTCTTGGGGTTGGTCTTGGCGGCG
CCGATGTTCTGCACGACCTCCATGCCGCGCGTCACGCGACCGAACACCGTGTGCTTGTTG
TCCAGCCACGGCGTGGGCGCCAGCGTGATGAAGAACTGGCTGCCGTTGGTGTCGGGCCCG
GCGTTGGCCATGCTGAGCGTGTAGGGCCGGTCGTGCTTGAGGTGCGCGCGGAACTCGTCC
GCGAACTCGCCGCCCCAGATGCTCTCCCCGCCCGTGCCGGTGCCTGTGGGGTCCCCGGTC
TGCACCATGAAGCCCTTGATGACCCGGTGGAAGATGTGTCCGTTGTAGTAGCCGTTCCTG
GCGTGGACGCAGAAGTTCTCGGCCGTCTTCGGGACGTCCTTCCCGAAGATCCGCACGTGG
ATGTCGCCCAGCGTCGTGTGTATGACCGCCTGCTCGTAGATCCGCTGGACTCCTTGGCCC
TCGGTGGCGGAGATGATATCCTCCTTGGACGGCTTCTCGTTGAAGATGTCTCTGTCGTTG
TCCGGGCCCTTGACGTCGTCGGGGCTGCGCTTGGAGAACAGATAGAACCTGTTCTTCTTG
TAGGCCGTGCAGAACAGCGTGGGGTCCGTCTTCACGGTCAGCAGCGCGGGGTTCTCGGAG
CCCTCCATTTCGAGGGTCGACGCCACCTTGGGCTGGTTGAGGCGGCCCTGGAAGAGTGCG
AGGTGCAGCGGCCTGAGGTTCTCCGTCCTGGCGAAGGTGGCGGCGCAGCGGTTGGTGGCC
AGGTTGACGAGCTTGGCGCCCAGCAGCGTGCCGTACAGCACGAAGTGTCCGCTGCAGTCG
AACGCCACGTTGCCCAGCGACACGCACTCAGACTTCTCCAGGTCGCGCTCCGTCGCCATC
CTCCTCCCGAACTCCATGTTGGGCAGCTGCTGCGTCTGATGCTGCAACTCCTGGAACCGC
TGCAGGCTCTCGTCGATCACCTTGTGCAGTTTGCCGGTCAGGAAGTGGAACACTCGCACC
TTCCTGTCGAGGCTTATCGAGGCCATCTTTCTGCCGTCCGGCGAGAAGTCCAGCGCCGTC
GGACAAGTCTTGTTCTTCACGAAGTCGTACAGGTCCGTGTCGAGCTTCGACTGAAACCTC
ACCGTCTTGGGGAAATTGTATTCGTGCTTCGGACCCGTCCAGTACTCGACTATGCCGGCC
TTATCGACGGAGACAGCAGTTTCGAAGACCGGGTTATACTTGATGACCGCCACCGCGGTC
TGGTGCAGAGTCTCGAACGTGTGCAGCGGAGTGCCCGAAGCTTGCGTGCCGTCGTACACG
TGAATCTTATTTGTGTTTCTGTCCGAGACAGCTAAAGCTGAGATGGGGTCACCAGCGGAA
TGCACCCACTCCACTCGATATGGCTCAAAATCTATTGATATCATGTTAATCATATCAAAG
TTAACAACATCAAACACCTTTATTGTCTTCTCTGGTGATGCAGTGCAGAGTAAAGTACCG
GTGCTGTTTGCTGCGACATGGGAGATTGGTGCTAAGTGACATCTGAAGTGCTTTACGAAT
TCTATACCTTCTTCTTGTTTCTTCCAAAATTTCAAATGACCATCCTGACTTGCTGTTACC
ACAAAATCAGTTTTTGTGACAAGTACGTGTGTAACAATATCCCTGTGCATGAAACTTCTT
TCATATGTTTCTGATGAAGGCAAATTCTCCAGGTATAGTGTTTCAAATTCTAATACTTTT
CGTTTTTTTTGTTTGGGTTTTACCGCCTCTGAAGGCATTGGTCCAATCCAGTTTTCTGGA
TCATCACCGTCACATTCTCCAGCAGCTTTTTCGTCATCGGCTGTTCTTTTCTCGGCGGAC
ATGTTTTATATTTATTTAATTAATTTAAAAGAGTTGTGAGACGTTTTGTTACCTACTATT
TACATAAAATCATAGAGTTACTATTCTAACTATTAACTCCATGCATAAAATCAAG
(1975 bp)

- SilkBase 1999-2023 -