SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12929_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]
Ontology
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:4.94 TPM:4.97
ORF EntryO_BomoSK12345_3prime_partial:A_BomoSK_comp12929_c0_seq1
Sequence
(Nucleotide)
GCCAATTGTAAAACGACGTCCCACAAAGAGTTTCTGTTTTCATATTTTTTAAACAAAGTG
ATTCTTCTTGATTTAGATTATTAAAAAAGTGAATGTTATTGTTAGTTCTATAAATATTGT
ATCTAAACCACACCAAATTTCTAAAGTGGATTATAATTATTCTGAGTAAGGCGACGTTAT
ATGTGTTTTTAGTCCCAACATTATGGGGTAATTGAAGGCGTTTTCGTGAGAACGAAGCGT
ATGTTAAAGAAGATACATACAGTATTAATTTTAAGACAAGGTTGTACGGAAAACCGGCCG
TCATGTATTCTATGAATTATATCGGTCAGTTCATAGCGAACTTTCGCGAATTCTATAATG
AGATCAACGCAGCGACACTTACTGGAGCTATAGATGTCATCGTAGTCGAACAGCCCGATG
GCAGCTTCACCTGTTCGCCATTCCACGTGCGTTTTGGGAAACTCGGCGTGCTTCGATCCA
GATTTAAAGTGGTGGACCTAGAATTGAATGGTGAGCCTTTGAATATCCACATGAAGCTGG
GGGAGTCTGGTGAGGCATTTTTCGTTGAGGAAGTAGGCGAAGACGAAGCTGAATGTTCCG
CTCACCTTGCCACCTCGCCCATCCCGGCTGCAAGGTTCGAGGAATTATATGAGCCACGTC
GTCGCAATTCGCTCTCTGCTGTCGAACCCGATCATGGGCAGGCATCAGATTATACTAAAC
GAAGATACACTGCAGACGGACAAACTATGCAGAAACCGGACTTGACCAAGATTAAGAAGA
ATACGACGAAAGACGAGAAACCATCAAAAGACAACGAGGCCCTGTTTGAAATGGAGGACC
TCGACGAAGGTACCGACTGGACGGACGGAAAAACACCGAAAACGTTCGCGGCCACTCAGC
TTGGCGAAGCGGAAAGCGAAGCGAATCAGGCCGTACAAAAAATTAGCGTCCACAATGACT
TTAGACCTATAGACGTCGCGCCCACCGAGGAGGAGGTCAAGCAGAATGGGAACGGCAAGA
AAAAGAAAAAAACCAGAAAAGTCAGCTCGAAGAAGAAGCACCAAAGAAAGTCGTCCACTA
GTTCTGTATCTAGTCAGTCGGACCGCGCTGGCTCGGAGCAACGAGCCTTGCAGTCGACCG
CCATTGTTAACGCCACTGATATGAGTTTCTTTAGTGACACCGAACTGAATGCTGCTACAT
TGAGCAGAGGTTCTCGGGGCGGTACTCCAGTACAGTCGGACACCGAGGTGGAGCTTTCGA
GAACAACGACCGGCGACAAGTCATCGCAGTCGTGGAGGTGGGGCGAACTCCCGGAGCCTC
CGGTGCGCGGGGTGGAGTCAGGCGAGTGCGCGTCGGCGCCGTCCCCTGCGTCCGCCTCCC
CCGCA
(1385 bp)

- SilkBase 1999-2023 -