SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12905_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_cytosolic_carboxypeptidase_4-like_[Bombyx_mori]
Ontology
GO:0001754 P eye photoreceptor cell differentiation
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0015631 F tubulin binding
GO:0016787 F hydrolase activity
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021772 P olfactory bulb development
GO:0035609 P C-terminal protein deglutamylation
GO:0035610 P protein side chain deglutamylation
GO:0046872 F metal ion binding
GO:0050905 P neuromuscular process
Transcript
Level		FPKM:0.92 TPM:0.92
ORF EntryO_BomoSK12274_complete:A_BomoSK_comp12905_c0_seq2
Sequence
(Nucleotide)
CACGCGCTCTAACGCTCCCAACACACACTGTTTATTTACCAACATATAACATCGCACATA
CGACATAGAAGACATCACATTCAACTTTTCGTATGGCGGACGATGCAGCGACGGATTGCC
TCTTCGAACGGCTCAGGTTGCACCAGCAGCGCTCTCCGGACGCGACCGAAGTGGCCCGCG
CTATCACCGCACGCATCAATGCGCGTCTCACTTCACATGACAAACAGATTCGCCAGAGTA
CATTGGATAAACTATGGAATAAACAGTCTGGTGGGATTCAGATGCTTCTCTCTATTTTGG
AATCTTCAAGAGACACGCCAACTTCGACCTACGTAACGGCTATTTTGAGGGAGACGCTAT
GCTTGAAACAAGGGAAAGGAAAGAAGTGTGCAGTTAGTGAATCCGGAAACAAGAAGAAGG
AAACCAAAAAGATTGGGAAGGAAAATAAGTTTGGTTTAGTCAAGAAGGCAAATAACCTCG
CCCGGCAGCAGTGTGCTCAGCAGTTCATATCCGCGAACGGTACTCAAGTTATCATTCGTA
CATTATTAGCGACGCACGGTAAACGAGATGGAAATGTTGGCACCGAGCTAATGCTGCAAG
ATCTTGTGTGGATCCTCGCGGCACTCGCGCCAAAAGATCCGAAATTCGCAATGAAAATTA
GAATGCTGGGATGCGTCAGGACTTTACATCTAATACTAAAAGGACATTTTACTGACAACA
AACTCGTTTTTCCCCTTTTGGTAATAATGAAACAACTAGCCAAAAACGCTGTTACGACGT
CGATTTTGATTCGTGATGGCGTTATCGGTACCTACGAAAGGGTTTTGGTGAGCCTCGGTT
TCATTCCCACGGCCAGACTACGGTTGTGCCTTGATGCCATTGACTACTTCAGCAAGAATA
AGGTGTGCTGCATGCAGATCGTGAAGACAGGCCTGTGTAGCGTCCTCCTAAGGGTGTTCG
ATCGATGGGATCGATACGAAGGTCGAATGAGACTGAAGATATGCGCCCACATACTACAGA
CGCTACAACATCTGTGTAACATCAAGGCAGGTCGTCGAGCTCTGTGCACTAAGAAACATG
TTCAAGCGCTGCACAGGTTCTGTTCGCAATGTCCCGATGAACCGGAGTTTGACGGTCTCC
TTGCGAGAGTGTGTTCAGTGATTACTTTATGTCTAAAGCATCAAGCTTTACCAGTAGCTG
CCGCTAGTCCGGCTACGTTCAACCTGAATCCAATTTTAAAAGGTACAAATGCATCGTGGC
CATGTCACGAAGACGAGGAAGACGCTGCTAATTCGGATTCCAAAACAGTTAACTCAGATG
ACGAAGACAGCCCGGATATTGACATCGATGCTATAGACGAATTTCCTGACATAGAATATG
ATGATGATACAAAAAATGAAAGTATGGAAGTATTGGATAAGATTAATATTAAAAATGGTG
ATAGTTTGCAAAGCGCCTTATGGATTAATCCTAATGAGAGAGATTTTGAAGACTTAAAAA
AGTATTTTATATTCTTCAAAGAATTTGGTTCCTATAATAAGCAAGCCAAACTCGTTAAAA
GCCGGTCCAATTCCCGCGGATCTATTTTAGAAGACTTCTTAATCAACCAAACCTGTTGCA
ATAGGAACGTTTCCTCTGCACTAAGCCTCTCAATATCTACAGTTTTGGGAACAACATTTG
ACAACGTATTGACAACATCTCAATTACCTACCTTCACGCAAAGCTTCAATAAGATTCATG
AGGTTACTTCGACAACATCTTGTTCTACTTTGAAGATCCATAAAGACATTTCCAAATATA
GTTCGTTTGCCTCAGTATATTGTACAATATCCTCAAGAGTGAAGAGTGTAATACCGTTTG
TGAAGGTTGCGTATCCCGACATGACAAGGGGACTGAGCATCACGCACCCAGAGCCTTTGA
ATAAAATGGAAAGGACAGCTTGCAGAGCTAAATTATTATCATGTGTGGACCGAGCAATAA
ACCCTGAAGCGTATATGAATGAAGTAGTTTATGATTTAGACCAGCTTTGTAGCTCAACAA
ATAATGTCGATGCAGCCGCACAAAAAAGTTGCGAAGGTTTATTACTGAGTAATAATGATG
AACAAGAAATAACGAAAGTCAACAATTTCTCTTCTCGATTAAGCTTTGAATCGAGATTTG
AATCTGGAAACCTCAGGAAAGCCATTCAAATAGGCCCCAGAGAGTATGAGCTCGTGCTCA
TGCCGGACGTTAACTCCAATAAAAGACACCAGTGGTTCTACTTTGAAGTACGTAGCATGC
AACAGGGAAGACCGTATATATTCAACATCATCAACTGTGAAAAGTCTGACAGCCAATTCA
ATTTTGGAATGAAGCCAGTTATTTATTCAGTGAAAGAAGCTGTTTTGGGTCGACCAGGTT
GGACGCGAGCAGGATCAGATATTTGTTACTACCGGAACAGCTACCACTACGCGAACCAAA
AGAACCACAACAAGTGCTACCTGACTGTCACGTTCAACATTGAGTTTCCACATTCCAATG
ACGTCTGCTACATCGCTTACCACTACCCCTTCACTTATTCAATGATAATGACTCGTATTT
GGCAATGGAGCCTGCAGATGCCTCCCGGTTCGTATTTCCGCGCTGAGCCTCTATGCTACT
CTTTGAACAGTAACGAAGTACCCCTTTTAACTGTATCTGCCGAGGACACGCCATCTAATC
CAATAGCGGATCGTGAAATAGTATTTCTATCCGCTCGTGTCCACCCTGGCGAGAGCAATG
CTTCTTGGGTGATGGACGGCACGCTGGGTTGTCTGCTCGGTGACTCTGTGGTCGCGGCTG
CGTTGCGGAGCAAATACGTGTTCAAGATTGTACCGATGCTTAACGTCGAAGGGGTACTCA
ACGGATGCCATCGATGCGGCTTGACTAATGAAGATTTAAATCGACGTTGGTGTAAGCCCA
GTCCGGTTCTGCATCCGTCTATCTATCATACTAAGGGCCTAATAGAATATTTAGTACGGG
TCTGGAAGAAGCCTCCGCTTGTGTACTGCGACTACCACGGCCACTCGCGTAAAAAGAATG
TATTCTTCTACGGTTGCGCTGGCGCTGAGAGCTGGTGTAGCAGTGACCGCCTTGTACAAG
ATGAACCGGTTAAATACCTCATGTTGCCAGCCTTGATGCACAGAATATCACCTGCTTTTG
CACTCGGTTCGTGTTCTTTCCGTGTAGAAAGAGAAAGGGAGAGTACCGCTCGGGTAACGG
TATGGAGACACCTTGGTGTTACGCGCTCTTACACAATGGAAGCCTCTTTCTGCGGTTTCG
ATCGTGGACCTTTTAAGGGTTTCCACCTGAACACCCAGCACCTGCAGAATGTCGGCAGCG
ACTTTTGTGAAGCTCTTAATGGATTGAACGACAGCGCTGCTAATGTCGACATTCAGCTAA
CGAAAGACCTGAATGGAAATATCATTGAAATTCACTTAGCGGTGTCAGGGGACAATAGCG
AGGCAGCAGTGGAAAGCGAACTGGGCTCCGGCTCTGATAGCGTTCTGAAAACCGATTCAG
ATGAAGACTTTGATTAGTTACTGAAAATTAAAATAATAAATAGATCGCTAGAGGCATATT
AGGATAAAGCGAGATTACATTAAAACTACATCCTTATTTTTATTTATTTATTTTCGAGCC
TTGATTTTATAAGTTGAGTGCATTTTGTTCGCATCCCTCATTAGCAACGAATTATATTGG
ACCATAATATTTTATTGAACCGCTTAATCACTAAAAGTCTGTAACAAAATAGACGTGGCG
TGAGCTATTAACTTGCACTTACGAGTTTTTAATACTAAAATTATAAGCTGCAAGGTTCAA
GTTTTTTTTTTTTGTTGATAAATTAGTAATGAATTTAGTTTTACACATTAAAATTGTTAT
AGAATAAATAAAAATTTTGGTTGGGCTGATTTTCGCATATTCACAATATTTAAATAACTT
TAAATTCTAGTTGTAGAAGATTATCGCTAATTGTCTATGTCCAATATGGCCTATTCTATA
CTATACTTTAAAAATATATTAGACTATTAGAAACAATATTTTTTCTAATACAAATACGAC
AATAAGACGTTAGGAACATTCTCAGAGATATTGTATTAAATATGTTCGTCCATTCTAATG
TATGCAGATTTTTTTACTGTCCCGAA
(4166 bp)

- SilkBase 1999-2023 -