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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12876_c1_seq1
Scaffold_idBomo_Scaf030
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_16-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006979 P response to oxidative stress
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.08 TPM:4.10
ORF EntryO_BomoSK12190_complete:A_BomoSK_comp12876_c1_seq1
Sequence
(Nucleotide)
TACTCAACAAGTTTTATTTGAACACATGTTAAAATTAATTAACTGGATATTCTTTTGTTA
TACAAAGTAGTAACTACCGTTTAATATAAAGCATCATATGCATATCTTTTAAATTTTTGG
TTGTGGTGTAATATTGGCTATTTCTTCTGCGGCTATCTGTTCGAATTTCATTTGAGCACA
TAAACAGCCTTCGCCGCTTCCGTTGACTATACATTCACCAAGCATTTCCCTGCAACTATT
AGGGATTTCAAATCTACTTGTCTGCTTTGCATCCATTACTTCTGGCATTACTATATCGCA
TATATCAAGCACTTTTATAGCTCCATTCACTACTTTAATAGTTCTATTTTCTAAATCAGT
CATTGTTGTTGAAATCGTGTTTTGTAAACAAGTTTTGAGTTTCGTATCTTTAACTTCGTC
AACTTTAGAACATTCGCAGCCATCACAGAAGTTTTCGCTCACGTTTTTCTCGCGGTCTAG
TGATTTTGTCCAGCTATTCGCATCTGATTGGGGAGCTGGATCATCATAGCCCTCGCCAAT
TCTCCGGCTCATTTGTTCACATAAACATTCTCGGCCTTCAGACTCGAGTAAACAACCGCC
CAATATCGTCTTACAACTACTTACGTCTTCCATAACGTCTACATCAGAAACGCTGTGATC
AATAGCTTCTTTATCCGAAGAAAAACTTTGAGATGCCGGTTTATTGTTATCAAAATTACT
TTTACACATAATTACATGTTCGTTGTAATAAATTTGGAATACAATTTGACCACAATTCGT
GCATAAGGTAGTTTGTAGACTTTCCTCCTCAACTAATGGTTCGGTTATAGATTTTGTATC
TGTAGTTATGATTTCCAATTTACTTCTGTGAGTTTCCTGATGTCTTTTCCTAGCATAATC
GGTAGCAAATTTCTTTTTGCAGTTCGTTACATCGCAGTACAGCCAATTATCAGGCTCGTG
GGTTCTGAGGTGAGCTTTCAGGTGATGTGATTGTATAAAACCTAAAAATTAAGATAAGAA
AGGCATTCCGAAAAATACGCTGTAGGATTTTTTAAATAAATCAGTGTGCTTAGTGCGA
(1078 bp)

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