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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12858_c0_seq1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106118534_[Papilio_xuthus]
Ontology
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009649 P entrainment of circadian clock
GO:0010114 P response to red light
GO:0035271 P ring gland development
GO:0042051 P compound eye photoreceptor development
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0060086 P circadian temperature homeostasis
Transcript
Level		FPKM:11.60 TPM:11.67
ORF EntryO_BomoSK12137_complete:A_BomoSK_comp12858_c0_seq1
Sequence
(Nucleotide)
GCACATTGGAACAAAGTGGAGTTAGTACCTACCTAAGGTCTTCCATTAATAATTCAAATT
GTTCATTATTACATAGTCAATACATACTATTAATACTGATATGGAATCTGAAGGTGAAGT
CGAATATCTGGAAGAGGATGCTGAAATAGTTCAACAATGCTTTCAAACTCCTCAAACTCG
AGAGTTAAAGCCATACGGGTCCAGCCCTGTGACCGATAATGATAAAACAGATTTACTCTC
CCTACTAGTAGAGCGCGAACGTCCACCAAAGAAAAAACGAAAAAAGGAAGACGACGATTC
TGATTATCACCCTGAAGAAGACGTTGCACCTCTTAGTCCACCAAGTACGAAATCAAAGAA
AAAAAAAATCGTTCCACAAAAAAAGCGGGCAAAAGTCGAAACTACTGCTAACAATAGTAC
CACTAATACTAAAGCCAACACTATTTCAAAAAGAATTAATGAGTTATTAAAAGAAAACAG
ATTAGTATCTGCTCAAGAAAAATTCGCCGTGCGTAAGAAACTAAACATTAGAATACCTGA
TTACGACGACCCGTTATGTCTACCTGTGAAAGCTGTGAAGCAAGATAACAGTGATCTAAA
GAGGTTGGGAGTGTGGAATAATGTTTGCATAGAGCATTTTAAGCACTGTGATACCATGCT
TAGACCAGAGCGAGGTAGGACACATAGTTCGTCGAGGAGTGTTGTGCTGAGGAATGTCCC
TAATAAACAAACAGGTAAAATTGAGACAACAATATGGAGCAAGACATGTGTTCAAAATGA
AGATGGTGACAAGAAATCTGAAATATTTCAGTGTGTGCTACCAAGATACAAGGAGAAGAG
AACCGTTAAAACCTACAGTTTATCTTCAAAGAAATCTAAACCAGTTCAAACTGTTGATGT
TGTCCTTTTAACGAAAGAAAAGCACGAAGACAGCGAAGCCTTGGTTGTCTATAAACCCAA
AGAGTCTATTTCTTCAGTTTACATGCTCTTTGATAAAAGCAAATCAAGTGCCCAGGATGA
AGGGAAATCCGAAAAAGATGATGAAGACCCTAAGATGTACATAAAGGAGATGACTTGCTG
CAAAATGTGCGCTGATTGTTACCAAAAGTCGTGGCGCGGTCCTAGGACATCTAACAAGAA
GCCCTTACTGTGTCCGATATGCGCCAGGACTTGCGTAACCGTTCACAATCTGCTTTCCCA
CGTGAAGAACCACAGTTCCTCCGAAGTCAACCGGTACAAACCTGTTATTAACGCTGTGTT
AGCCGAGTTTGTGGATTACCATTACCGCTGCAGGATATGTCAGGAGAAATTTAATTGTAT
AAGAAATTTAAAAATTCATCTTAAAACTCATAAGGCTGAATCTCAGTTTTTGTGCGAAGT
TGGAAATCACATCACGCAGTAATAGG
(1406 bp)

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