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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12831_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007280 P pole cell migration
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0019730 P antimicrobial humoral response
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048542 P lymph gland development
GO:0061321 P garland nephrocyte differentiation
Transcript
Level		FPKM:3.31 TPM:3.33
ORF EntryO_BomoSK12076_complete:A_BomoSK_comp12831_c0_seq1
Sequence
(Nucleotide)
GCAATATTCAATTTTTTAACACATTTTCTTTCAACCTATGTGTATGTTTAACAATCTAAA
GTAGACACTTACATTTAACAAATTAGCAACCTTTACGTGACACTCGCTCGCAAATACAAC
AAACACATTAATATTATATGGCATGAGGAATTCACATTCGCTTACAACTTCAAACTTTAC
ATACTAGAAGAAAATACTTTTTTGCAACATTATTATTGCACAATAAAAATAAGCTACAGT
ACTTAATGCCTTCAGAAAGGAAATGAAGCTTATCTTTTTTTGGCACGGCGACTTAACATT
TACTTATTTCCTAGACGTGGTTATTATTTACAGATCTTCACGTCGTATATTACGTAAGTT
ATCTTTGGTTTGTCTAGCCCACCTGTCAATTTTGACACTTATCAATTTATTAAAAACTTA
TTAAAAATAATATAAAATATTTGAATGCTCAAATAGGATAACGTACACATCTTACCTAGA
ACTACTGTTTTACCTTTCTTATTAAATCAATGTATTATTAAAGCGATGGGGTTTTTTTTC
TACATGGTTATTAATTTAATATGCTGAATACTGACGGTGGAGCACAACACGTGACGAGAC
AAAAACAAGCAAAACTATGACGTTTAAACAATTCAGAGCAGTATTACACATTTATTTAAC
ATTATCAAGGTTAATTTGACTCGGGTCCTATGAGTAGCCCGGTTAAAGCACCGGAACGAT
TAAAAGGAAAGATCACATTATTTTCGTAATTGTATAAAAAAGTGCATACTTGGGTTTAAA
AGTTTAAGACTTCCACATACTCAAATACGAGTATTTATCACATAATTTTATGTCAAGTGC
TGCGCTTTAGTTTGTGACAATCTTCATCTTTAGCTAATATTGTTACATATTGTACATTCT
TTGGTTTATTGATAACAAAGGAAAATAATAGACTAGGTACAAGATCTTCTGTAGAAGAGG
CTAAAATGTACCTATATGAAACTACAAAGTAATCTGTTATTCAAGTATAGACGAGTGGAG
TAATTAACAATTAAAATGAAACTGATGATAAGGAATACCTGATGGACCGATGCCTGATGT
GCGCTCACACCACTAACCGTAAGAAAGGGTTCAAATACTGCAACATTAATTATTGCTAAT
ATATATTTATACATAGTTCATACTGTTATTACATGTAATTCGTTGATTGGAAACCTCTGA
AAAATTATTCTACTTACGTAATTACTCTATTAAAAATATATAAATTATATTTTATACACT
TAAAATGTATTTTTCGGTTAGGAACTTTGGTGTTTTATAATGCGGAAACGAAAGGAAATG
AAGTCAGAATTATGTATCCGGGATTTGTAATAGAATATAAATTGGATTTTATATGATATT
TTAGTACAAGAGAACTATATTTTACTAGATACTACAAGTTTTCGGCAAGAAGGATACACT
AGGTCAACAGCATATAACGTGATATAGTACATGGAATATAGTACATATCTTTATGAATAG
AAAATATTTTTACATCAAAATAGCTTAGAAGCAGCGTGCGTTATTGTCACCGTATTGTGT
ATAATGCAGTATCGGACTGCCGTTATTAATTAAAGCGATCATATTTACACATAAATTCGT
TATTTACAACAATATTTACATCTTATAGAATAAATTTCAACGTTGACTGTATAAAATAGT
TTCTTAAACACATCAGAGATCCCATAGACGAATTATGGAATGCGTAAAACTTAAATAAAA
TTGTATCTATCTAAATAATTATTACGATGCAAGATTAGTATATTAGTTTATATTTCTCTA
TAAACTGGTGGAATCAAAGAATAGAACATGAGATTCTAACAGTGAGGCTACAAGATGTTC
TGTAATGTAATCTGTTATGCTCAATGGTTTGTAAGTTAAGAGACCAGCTGCAGTTCACGA
TCAGGGTCGCAGGGCTCTTGCCGCAAACTTCGCAATGGGAAATCAGATCCTGTTCTAACT
GTACGTGCCGACATTTAAAGACTCCGTGGTGCGTCAATTTTTTAGCAGAAATACTCTGTA
GGGCGTTAAGCGGACTTTTCTAATGAAACGGCTAAAACTTTTCTTTGTATAGAGGTATTC
AGTACGCTCGGGAGGACGCCGAACAACAAAGACGATCAGGAATCGACACCGTTTTGTGTA
CATGTGAGGTGAAGCACTATGACCGGGCAAACATTAGCTAGTTTCAATATCAGAAATTAT
CTGCAGTATCTATAGTATATGTTCTTAAGGTGTATTATTTAGTGTTTTATTACCAGTGCG
TTTTTATTTATTAGAACAGGGAACATCCCTCGATATGAGTCGCTAGTGTGTTAATAGTTG
TGTAGATCCAAAGAAAAGCTATTTGTATTGAAACATCACTCACTGTTGAAGTTGCTATTC
TCTGTATTTATGTATTTAAACAGAAATACTTAATTATAATATATAACTAGTTTTAAAAAT
TTGAAATTCAATCTAGATCAAAAGGTAAAATAGTTTTAATTAGTGTAACAGCTCACTTTG
AAATTGAAAAAAATGTACAATAAAATCAATAAGATGACTATTATTAATACGTTATGGAAT
TATATTTACGTATATTAAAAAAATCTATTCTTTGTTTTAAAACTAATATTATTTTGAGTA
TTATACTACAGGTACGGGCCTTTGCGATTACAATAGAAACTATACTTAGAATTATCGCGA
ATTTGTAACGGCATTGAATGGCACGCGTTTCGGGTAATTGGCACTCAAATGAATAAAAAT
AGCACATTACAATTTACAGACTTTAGAACTAATTTGGCATTTGATTTGGTACTCAATGGC
ACACTCTCCTTACAGCCGACACTAATATGAAACATAAAAATTGTACAAAATCAAAAAGTT
GAGCAACAACCATAAAAATACCTCGTGAATACTATAGTACCCAATGAGTATCAGGTAATA
TTTCGTTGTTCATAACATTGTTACCGTAATAAATATACTATCTCGTGTCTTCTTACACAT
ACTTAACATTAACGCCAAGCGTTATGTCCGGAGCGGCGATCCTAATTGGTAACCTTATTT
TACATCTAAAATAAACATTTTGGCACATAATCTATTTGGCATCGATATCGACGTAATAAT
CCAAGTATGTACTATAAGCGAAATAATAGATAAATCCAAGTATTTCACACTCTATCCCTA
ATTATATCTACTCTCTGTAAGGCTTGCAAATGGCGAACCGGTGATTCATGTGTTGGCTGT
ACGAACCCGAATGGGAGAATTTCTTGAAGCATTTACAGCACTGGAAGGGCTTTTCCCCGG
TATGGAGTCTCTTATGTTCCGTGAGGTGGTGTTTGTGTTTGAACGCTTTCGGGCACTCCT
GACACTTGTGAGGTCGCTGCCCTGAATGTTCGTACTTGTGTCTGGCTAGAGAGCTCTGTT
TCACAAAGGTCTTGTCGCACTGGTCACACACAAATTGTCCTTCTCCTTCCTTGACGTCGA
CGTGCTTGAGCTTGCCCTTCTTAAGTACAGTCGGTTCATCGTCGTATTCGATCGAAGGTT
GGACGTCATCAGCCCAGGGACGGTCGTAGGACGGGCTGCCGTGCCTGGTCACGTCACTCG
ACATATGCATGTTCAGGATAGGAGATCTCCCATTGGCCATGTCGTTGTACTGCAGCAACT
TCTCCATGGGTACTAAGGGATTGAGTTTCTGGGGCAGCAAACGTTTCTGACCGTTGATCT
CACCGGGCGATGGCGACAGTCTAAAGTCAGTGAAAGAAGATGATGAGCAGTTGGAATGTG
AGTAAGTGTTGGTGTAATTGGTGCGATGAGGCGTTGTGCTACGTGACGACTTTTGACTTA
AGTTCACAGCTTCCTCGGAGTCGGAATGTGTAACTGAAATGCTGCAAGGCGACGGCGACG
GCGTGGAGGTCACCGATTGGTTCGATTTCTTCGTGGACAAGTCTAGCGGTTGGTCGGGCG
AGAGCTGTGTTTTCGTCATTCTTCGCTGCCTGGCCCTAAAGTTTTGGAACCACACTTGCA
CCACTCGACTGTCCAATCCGACTTGCTGAGCTATGCGCTTGGATTCCTCCCGGTTCGGTC
TCTGGTCGAAGCAGTAAAATGCCCTCAGTTTGACTTGCTGGACATCAGTTAGTGCGGTGC
GGACTCTGATTTTCTTGTCGTTGTCGTGAATAGAAAGTTTATCATCGTTCTTGGAGTCTT
CGTCTTCGCTCGCACTCGCGCCGCTCTGCAAGTTGTTCCTCATCTCAGCTTCTATCCTGG
TGAGCGCCACCGTTTCCGCGACTTGCGCCGCTAAGCTCTCATGCTTTCTAAATATATTAT
CGCAGTGTATCTTTTCGTGGTCTAACAACTCGTCCCTACTTTCGAAAGTGATGTTACATT
TAAAGCATCGGTTTAAGTCCTCCGGTTCTTCCTTTATGATGACATGCGGCGTCGGAGGCG
ATTCCAAGCTAGGACACACGGAGCCGGCGACCGGGGACAGCTTGTCTGCATTAGTACTGA
TGAAATGTTTGGTTACAGATGCACTAACTGATTCTAATATGGTGTTGAATCTGGATTGAT
TATTGTCTTCATCTTGAACATTGCTGTTCATTATTGGGACGGAATTATATTGAGATGGAG
GCCTTGATTCACAGTCTTGATCTTGTTTCTCCTTTTTAACCGTAACTGCCTCATCATCCT
CAATATCCATGACCAGTTCAGCGCTCCCTTCTGATCTCTTGTCTTCTTCCTCGGTGACTT
CTTCGATTAGATCTTCGGGAGCCTCGGGATTATAGTGTTTCGGGCTGGGTAGTTTCTCTA
TTTTCCTTGGCGGACACTGAGATGAAGCTAATTGTTCAAAGAATTGGCTTAAGCTATATG
GAGTGATACCACTCGCAGGACTCATTGGTAGCCCCGGGGGCAGATAGAATGGATTAAGAG
CTGGCTGCCCTAAAGGCGGGCGGTGGAAATTACTATCTTGTGACGACATGGAAGCGAAAA
AGGCAGCAGCTTCGTTGTATTTTGGAAGGATAGGAAGGAAAGTGTTTCCGTTTGAGGGTA
TGTTGTTGTTCAATTGAGATGTTGCTATTGCGTTCGCTCGCTTCCTAGACGGACTTCTGT
TGGGGTTGAGGGCAGGGTTGTTCGGTTTTATTCGGCCCATTTTAAGGTTCATGACTAGGC
ACTTCTTGGAGGTCATATGACTCGAATATGAACCAGAATGTGAAAATTTCTTCCCACAAT
TAGCGCATTCGAATGGTTTCTCTCCGCTATGTATCCTGTGATGCTCTTTGAGGTGGTGTT
TGAACTTGAAGGCTTTGTCGCAATCGTTGCACTTGTACTTCCTCAGGTCGGCGCTCTCGT
TGTGGCTGATCATGTGCCGCTGCAGTCGGTACACATTCGCGAAGCTCTTATGACAGATCT
TGCATGTCTGTGTGCTGGGCGTGTGCAAGGTCTCGTGTCGGTCCAGTTGCTCGCGCGTGG
GATAGGTGCCTCGACACTGGCTGCAGGTAAACGGTCCTCCGGGGCCCAGCGGGGAGCCCC
CGCGGTCCTCTTCTTCTTCGGACGGCTTGCCTTCCGACCCTCCGCTCGCCAGCGGACGAA
TTAAGGCCGCAAGCCGCCTGGCCGAGGTGGTGGACGTCGGGACTTGCTTACTCCTCATGT
CCGCAAGCCAAGCGGCTGCCGAACGTTCGTACCAACCGCCAACTCCCATAAGCGCGCTCT
GCACTTTCATCGAGCGACACCGTTCTCACACCTCACTGAACGAGACCACCGGCTACTATC
AGATTCCGATATCGCGTCGCACAACTCGCGGACTATCAATCGCAATTACGTCGTACTAAA
CCGAGAATCACAGCCTCCGCTGACGTCAGCGGTGAAAGTTCGGGGACGGGCCGCCGTCGA
GGCACTACTCACATCGGCAGGCGCCCCACACGTTGGCCAGGCTCCACAGGCGGTACGAGT
AGCTGTCACCATAGCAGCCAAACATGCTCTCATCGGTTCTCGCGACCATGGCCCGCGCGC
GGTCGGACGTGCAGTGTGGTGCGCG
(6025 bp)

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