SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12781_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0003779 F actin binding
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007411 P axon guidance
GO:0008091 C spectrin
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032403 F protein-containing complex binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051693 P actin filament capping
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
Transcript
Level		FPKM:13.00 TPM:13.08
ORF EntryO_BomoSK11934_complete:A_BomoSK_comp12781_c0_seq2
Sequence
(Nucleotide)
GCGCGCTGCACGACGCCATCCGCGCGCACCACGCCGAGCTGCAGACCCTCGCCGCGCACG
CAGCCCGCCTGCAGCAGGCCGGCATACAGTGCCTCCAGTTACCAACGGAAGTGGAGTCCA
CTCAGGGCATGGAAGACGAGGAGTGGGTGAACGAGTCCAGGCTGGTGCCGACCGAGGTGT
GGGAGGAGGAGCCGGTCGAGAGACTCGAGCACAGGACCGTCACCGAGGAGAGACAAGTAC
CGCAGGTGAAAGCGCTGTACCCATTCACGGGCCAAGGGATATCGATGCAGAAGGGCGAGG
TCATGTTCCTGATCAACAAGACGAACCCGGACTGGTGGTCGGTGCGGAAGGCGGACAGGA
CCGACGGCTTCGTGCCCGCCAACTACGTGCGGGAGATCGAGCCCAGGGTCGTGCCGGTCC
AAGTCCGCAGACCAGAGAAGGTGAGGACGGTTCAGCGCGTGAAGAAAACGGTGCTGGTGA
AGCAGGTGGTGCCCGTGAAGAGGAACAAGCCGACCGCCAGGAGGGCGTCCAGGGTCCAGC
AGAAGGTCGTCACCGTGGCAGCCAGGATGGCGGACATACAGAAGGACTACGACGAGTTGG
TAGCGTTGTCGTCTGCGCGTCGTGAACAACTCGAGGATGCCATAAAGCTGTACAGCTTCT
TCGCCGAGTGCGATGACTTTGACAAGTGGATGAAAGACAAGGAGAAGTTCCTCAAGTCTG
ACGACGGCGAGGAGAGCGTGGACACCGCCAAGAGGAAGTATGAGAAATTCGTGACCGATC
TGTCGGCGGCCTCCAAGCGCTTGGAGCACATCGACGAGGCTGCCGAGGAGCTGGTCTCCG
CCAGGCACGGGCAGGCCAGCAAGGCGGTCGCCAGGAAGCAGCAGCTGCGCCAGCAGTGGG
ATAAACTACTGCGACTGAAACAACAGAAGGAGAAGAGCCTGGAGGGCGCGTCGAGCGTGG
AGTTGTTCAGCCGCACCTGCGACGAGGCTCTGGAGTGGATGGCGGAGAAGGAGCAGCAGC
TGGCGGCCGGGCCGGGCGCCGCCAGCGACCTGCGCACCGTGCGCGCGCTGCAGCGGAGAC
ACGCCCAGCTCGAGCGAGACCTGCAGCCGCTCCGGGACAAGGTCGCCACCGTCAGTCTGC
TAGCCGACTCAGTGAAGTCCCAATATCCGAGCGAGAGGGCTAATGTGGAAGCGAGACAGA
GAGAGCTTCAGCGCGTCTGGGAGAGGTGTCGGCAGCAGGCTGATGAGAGGAGGGACAGGC
TGGAGAGCGCCGTGGGGCACCAGATATTCGGGAACAGTAGCGCCCAGCTACAAGGCTGGC
TGCAGAAAACGAGAGAGCAGCTAGCGCAAGAGGCCACCGCCAAGGACGTCGCGACGGCCG
AGGCTCTGCACGACCAACACAAGGAGCTGCTGGACGACATCAAGACTCATGACGACGAAT
TCAAGGAGGTGATCGCTCTCGGCAAACAGCTGCTGTCCAAGAACCCTGCGCTCACGGACG
TGGCGGACAAGATCAAGCAGTTGGAGCAGGACCAGAAGGCGGTCGCCAAAGAGTGGCAAG
ACAAGGACGCATATCTGAAGCAGCTGGTGCAGTTGCAGTGCTTCAACCGGGAGGCCGACC
AGATCGACGCGTCGTCCGGGGCCCACGAGGCTTACTTGGACTACACGCACTTCGGGTCGT
CGGTGGATGAGGCCGAGGCCCTGGTGAAGAGGCACGAGGAGCTGGAGGCGCGGCTGGCGG
CGCAGGACGAGAGGCTGTCCGCCTTCGTGCAGCGGGCTGACGCGCTGCTGGAACTGCCAC
ACTATGCTGCGCAGCACATCGTGTCCCGTCGCGACGCCGTGCTATCCCGTCGTGACGCTG
TGCGCCTGGCCGCCACCGAGCGACGCCGCGCGCTGCACGCCAGCCTGGCGTACCAGCAGT
TCGTGGCGGCAGTTGAAGAATTGCAAACTTGGATCCAGGACAAAACGAAGACTGCCAAGG
ACCAGAGCTACAGAGATTTGGCCAATTTGGAGCGTAAACTTCAGAAACACGAAGCATTTG
AAAGGGAGTTACAAGCCAACGAGAAGCAACTCAGGAATGTTGAGAGTATCGGACAGTCTC
TGCAGAAGTCGGATCCAGCACGCGCCCAGGAGGTCAGCGCGCGGCTGGAGTCCCTGCGCG
AGGCCTGGGAGGCGCTGGTGGCCGCCTCCAGGGACAAGGGGGGCAAGCTCCGCCAAGCAG
CTCAACAGAGGCAACACCGCAGGTCTATTGAAGACGCGAAGGCGAGACTGGTGGAGTTGG
AGAGGGCGTTGAAAAGCGAAGAGATCGGCACCGACTTGAGGAGTTGCAAGCGACTGCTCA
ACCAGCACCAGACTCTGGAGCAAGAATTAAGTCAGTGGGAGCAAAAGGCGACGGTGTTGG
CTGCTCAAGGTGCCGACTTAGTGTCGGCGGGGCACTTCGACGGGCCGGCCATAGAGAGGG
ACAGCGCTGCCTTACTGCGGGCCGTGACGGCGCTCCAGCCGCCCGCCGAGGCCAGGAGGA
AGGCGCTGAACCGAAGTCTCCTGCACCACAAGTTCGCTGCCGAGGTAGCCGGCGAGTTGG
ACTGGCTGTCGGAGCGCAAGGCGGCGGCGTCGTCGGAGGCGCTGCCCGCGGACCTGCACG
CCACCCAGACGGCGCAGAAGAAGCACGGGAAGCTGCGCGCCGAGCTCACCGGCCGGCGGC
CCCTCATCGCGCGCGTCATCGAGCAGGGCCGCGGGCTGGTCGCAGAGGGACACCCGCAGA
AAGATAAGATCCTGGCTCTTTGCGAAGAGTTGGAGTCAGCGTATACCGAGGTGTCGGCGG
CGGCGGACGCCAGGGCCTCGCGTCTGGAGGCCGCGCTGAGGGCGCAGCAGTTCTTGCACG
AGGCCCGCGAGGTGGACTCCTGGCTCGCTGACAAGGCGACAGCTCTCTCCACCGACGACG
TTGGAGGAGACAGACATCGGGCCACTCAACTCTTGACGAGGCATAAGGCTGTAGAGTTGG
AACTGGACACGTACGCCGCGATCATCTCTGAGATGGGCCACGTGGCGTCGTCGATGCTGG
GCTCGGGACACCCGGAGGGCGGCACGCTGGTGTCGCGCCACGCCGCGCTGGCCGACACCC
TGGCGAGGCTGCAGCGTCTGGCGGCGCACCGGCAGCACGCGCTGGTCGAGAGCGTCTGCA
GGCACGAATACTTGGCTGAGAGCGAGGAGTTGGAGCACTGGATCCAGGAGCAGTACGCCG
CAGCCTCCAGCGAGGACTACGGCCAGGATTACGAACACTTACTGATCTTACGGTCTAAAT
TCGATGAGCTCCGTCACCGCGTCGAGAGTGGAGCGGAACGGTTCAACCAGTGCGAGGAGC
TGGCCAAAAAGCTGCTGGCGTCCGAGAGCCCTTACATCGAGGACATCGAGAAGAGACAGG
AGGCGCTGGGAGAGTCGTGGCAGCGACTGGTGGAGCAGATCCAGTCGCGAGGGTCTCGTC
TCCACGCGGCGGGCGAGATCCACCGCTTCCACCGCGACGTGGGCGAGCTGGTGTCGCGCG
CGGCGGACAAGCGCGTG
(3557 bp)

- SilkBase 1999-2023 -