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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12741_c0_seq5
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105841398_isoform_X1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008134 F transcription factor binding
GO:0030154 P cell differentiation
GO:0044212 F transcription cis-regulatory region binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.04 TPM:1.05
ORF EntryO_BomoSK11819_complete:A_BomoSK_comp12741_c0_seq5
Sequence
(Nucleotide)
GGCGAGGGTGCTGTGGCGCTGCAGCTGCGAGAGGCGGCCCCGGGCGAGCTTGATGCAGCG
CGACTCCACGACGAGCGTCTGGCCATCGCCTGCCACGAGCCCGAACTGCTGGCTGACCTC
CTGCACGCCGCGGCTGATATCGATGGCGAGCAGGATGGTCTCACAGCATTATTGGCTGCG
GCATCGCCTGACTTGGCACTTGCATCCGATGCATCCGACAGCCTACCACTACCCGACCAC
GATCATGATTGCACCACGTCATTGCCAACTTCGAGCGGAATATTGAACGGTATAGCCACA
GTGTCCGTTGCAGTGACAGGGCTCGAAGCCAAGCCCCCGTTCGCCGTGAAGAAGGTCCGA
CCCAAACCCGCATCACCCAACCGACAAGGCCCCCAACAGTGTCAAGTGTGCAACAAGATC
TTCGGTAACGCATCTGCCTTAGCCAAACACAAACTAACGCATAGCGACGAAAGGAAATAC
GTCTGCATCACATGCGCGAAGGCTTTCAAGAGACAAGATCATCTTAACGGTCACATGTTG
ACACATCGAAACAAGAAGCCATACGAATGTAAAGCGGACGGATGTGGGAAATCATACTGC
GACGCTCGCTCCCTACGGCGGCACACGGAGAACCATCACCACCCACCGGCAGACGGTAAA
AACAGCAACAGCTCAATCGACAATGACCGAGAACCAAACTCACAGCGCGTTTCATCTCCA
ATATCACCGGGACGCAGCCAACCTCCGCATTCCGATTCGAGCAACGGATCGGAAAAGTCA
AGCGCAGCTACAAGCGGCAGCGGGGGCGGGAGCGATAGTCCACCGTGTACCCCACCGACA
CCAGTCACTCCGCCCGTAAAACAAAAGACCAAAGCCGCAACCAAGCCGAAATCTTGTAAT
GCAGCGCAACAAGGAAACACGAAATGCGGCGGTGGTGCTAGTGCGAGCGGGTCCCACAGC
AGCACAGCAAGCGGGCCGATACAAAACGCTTCACGTACTAACGACGTCAAACCAGTCGAA
TGTAACCTCTGTCATCGGAAATTCAAGAACATACCCGCTCTAAATGGCCACATGCGTTTA
CACGGAGGATACTTCAAAAAGGATTCAGATAGCAAAAAGCTAGATAAAAAAGAAACGACC
GGACCACCTCTGCAAACAGCATCCGTCTCGGTACGAGCCCTCATTGAAGAAAAGATCATT
AGCAGACGAGGGGCCACGGCAAGCTCGACGAATTGTACGAGTACGGATACTGTAGCCTCA
CGTTCTGGTTTCGTTGCGCCAGCGCCGCCACCGCTGTCAACGATACGCGCGTCATCCTCA
TCACCCGCCACTACGTCGGCACAGTTCGTACCGCCACGGGCGCCATCCGCCGTCACTGTG
GCCGCGAACTTATCTACTAACATGAGCGCCGCACAAAGGGACTCTACTCTAATCGAACTC
TTGAAGAAAGGGAACACTAAAGCTGTCAAACGATCGGCATCGGACCCGGGACACGCATCG
CCACAGCAAGACTACACGTTTCGTCCGGAACTATTCGGGGTGTCCTTTAACTCTGATGAC
GGGTATTTCTCGCCGGCACTAAACGATGACACGTTTCAATTCACCTCCGCGCCAGACCAA
CTAGAAGATCTAGCTTCATTGGAAGACTACGCAACTGTGGCTGCTTCGATAAGAGAAAGA
TCCCCGGTCACATTCCCGTACAGTCGACGTCTGGCTGCGGTTCTAAATTCACCTCTACCG
GAATCGTTGGCGGATTTCGGCGCATGCCATGGTGGTTCGCCGGTCACCTCTCCCGGTATC
GGATACACGGCAAATTCACCGGGACTATCGTATACGACCGGGGATTCGCCGGGCTTAGCG
TACACAGCAGCGTCGCCCGGTGGCAGTTATTCAACGCAGCCTTCGCCCGGTTTTACTTAC
CCAACGCCACCAGCTTCTCATGATGCTCATTCTCCGGCACACACGGTTCCTCGAGCGTCA
TCACCGCTATCAGCCGCTTTTTTCACTGCCACTATGTCCAGTCAAGAAGAGGTTGAAGAA
GCCTTAGAAGAAGTTTTACCGGAGGAATGCAGGTCACTTGATGCCTATTCACTGGAGCCT
TCGCAAACCGCACGCCGTATCATGCTCAACTCGGAAGACCCTTTGCTATCGAGCAGCCCC
AGAGATTTCTCCCATCAAAGAATATTCAGGCGTCAACATCGGAGCGTCGTAAATACTACT
GGACATCTACAACAATGGCAACATGATAATTCACTTCAGGTCTGCGTTGAAGGTCGAGAT
ACGGTACCAGCTGTGTTCTTAAGTCCGAACAGTGTGCCGGCGTCACCACAACGAAGGAAA
CGTCGAGCATCACCTGCGGGTCCTTACCGATCAAGGATGCGAAGAGCTATCAGTCACTTC
ACGCCGCAACCGATGCTACCACCCGAACGCGATGGCTCTGGACTATACATAGATTTGACG
GCTGGAATTCTATCAGAAAATGATGGTTTATCGCAAACGGAGGACGTTCGAAAGCCGCAA
ATAAATATCGGGACTAATTTCCAAGCCGAATTACCAGAGCTGTACAGCGATCGTGATGAT
CTACATCGAGCACCGGAACAACTCCTTTGGGATCCGGGCATAAACGAAGCGTTAGAAGAC
AACGAAGTACGAATGTTCATGGAACTAGCGATGTGTGCTGCTATGCCAGTCGGGGGGCAC
ACAAGAGAATTTGCCTTACAAACTTTAGGAGAATGTGGCGGAGATATCAGAGCGGCCACT
CTACGACTAATGTCAAGACCTGTGGTGCCATCGCAGCACGAGTCGCGTTGGGCGCCCGAT
GAAGTCGAAGCGTTCTTATCTGGACTAAGCCATTACGATAAAGACTTTTTTAGAATTTCG
CAACTGGTTAGAACAAAGGACTCGAAGCAATGCGTTCAATTCTACTATTTTTGGAAGAAA
GTAACGAAAGACTACAAGACCCAGTACCTAAGGAGTTGGTGTGCCGATCCGCATACATCA
CAAGGTTCTGTAGCACAAGTAACTACACATAGCAACACCTCGTGCACCTCATCACCGACT
TCATACGACAATGAGGAGTACCCATGCAAGATATGCGGGAAAGTATTTAACAAAGTAAAA
AGTCGTAGTGCACACATGAAGTCACACCGGCCTCTCGACGCCGAAACGAAAAAATCAAAA
CTCGAAAAGCCTTATGAAAAGGCCGAGAAATCTGATGGCAGACATAACACAACAAACGAA
TTTCACAAAACGTTGTAACACATGCTGGCATAAAGTCGGCGGGTTCTTGTGAAATGCTAA
AATGTAATTATTCTTGATTAAGATAAAAAGATCGCAAGAGCTATAAAGACTAAAATTTTA
AAAAAATCGACTTGCATCGTTACAACAAAACTTTTTACTAAGCATTTTACAATAATGTCC
CCTTTGCATTGTACGCTATTAAAATATGATACAATTGACACCCCGCTCATTCGCACAGCG
TTGTAAAGATAGATTATACGCATAACATTTGGTTGTGAACCCGCTGTCCGAAACATGCCC
CCCCCCCCCGTGCACATTGTCGCCACCGACCCCCACTCACCACACACACATTGTTTACTC
TTACTTGAACTGTTCAAGAAATAGCCAGTAAATGTTAGCCTCCAGATTTATCAACGAAGC
TTTCTGCAATTATAGAGACCACTATTTTTAATTGCCAAAATTAAAAAAAAACCTTGTATC
TGTGGATACTGAACATTTAACTCAAACAAAAAGCTGATAATGATAATTTATTCTAGAACA
AATCTTTAGTCAAATGCGATTTTACTTTCAATTTCAATCATTTAAATTTTACCGTTATTT
GTTTTTGGTAAAAAAAAACTGATTGATGTTTTTAATTAAACAGCCATACAATAATATTTA
TAGTCTAGCTAATTTATTATTTAATTCAACTCATAGAGCACAAAGATATTTTGTATGACG
ATAGATAGATAAGTTTTGTCTTCGTAAAGTTTTATATGACAGATTTCTCAATGTGACTTG
TAAGTGTGATTTTGTAAATAAAATATGAAGGTAGTTGGTTGTAATCGCTACGTTAGAGAT
GAGCTATCCAAGATTACTATTGATCTATTTAAGTATTACAACTATATTACGTACGTGTGA
TACATAAATCGTGTAGTAACTACACTACCTCGTTTCTATATAATTCATTCTATCGCGAGC
ACAGCTCGTAACTACTTTGTTATAATATTATGCTTGTTTGCTCATTTTCTTTTTAAATCC
TAGATGTTACTTATTTTAATTTATTATTTTCTAGTCGTATTCTGTTTTTTCATGCGTTAT
TCAATAGTTATATCGATTTAAGTATGTTTATGTTACAATTAAA
(4363 bp)

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