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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12716_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		dsp_protein_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006338 P chromatin remodeling
GO:0007379 P segment specification
GO:0008134 F transcription factor binding
GO:0008301 F DNA binding, bending
GO:0008348 P negative regulation of antimicrobial humoral response
GO:0017025 F TBP-class protein binding
GO:0017055 P negative regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0032502 P developmental process
GO:0035218 P leg disc development
GO:0043388 P positive regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:43.89 TPM:44.14
ORF EntryO_BomoSK11728_5prime_partial:A_BomoSK_comp12716_c0_seq1
Sequence
(Nucleotide)
GTCGCTGATCGTGTATTTATCTCGTAGAGAACGCGAAGACTGCCGAATACCCTGCGTAAC
AATAAGCGCTGAAATCGTGTGCTCGTTTGTATTGAGAATTTTAGTTGTCGCAGAATCAGT
CAAATCAAGAAAGCGATCAAAACAATCAACAAGCGAACGGTATTCAACAGAGTCATCAGT
CGATCCAACAACAACAGCAGCAGGAGCAAAATCAAACTATTCAACAGCAACAAAGTCAAT
TACAACAGCAGTTGCAGCAACAACAGAATCTCCAGCAAGCTTTGCAACAGCAGAACCAAT
CTTTGCAGCAGTCGTTACAACAACAACAACAACAGCAGCAACAAGAAGAGCAGCAACCGA
CCCTGCAGCAGATGCTACAGCAGCATCAACAGCAGCAGCACCAAGGCTTACAACAAACTT
TGCAGCAGACATTGCAAGTTAGTCAGGCTCAAGCCCAAGCAATAGCGCAAGCCCAAGCAG
CCTTACAGCACCAAGTTGCTCAATCAATACAGCAGCAACAACAAACTCTACAAGAACACA
TTCAAGCTGTTCAGCAACAACAGATACAGGCAGCATTACAGAGGCAATCTGCCACTCTAC
AGGAGCTGCAGCAACAGGCACAGCAGCAAGCTTTACAGCAAGCAACAGTAAATAAGGCCA
GGATGCCCCGTTCAAGGCCATACAACAAGCCCCGCGGTCGCATGACAGCTTATGCATTCT
TTGTGCAGACGTGCCGAGAAGAACACAAGAAGAAATACCCTGATGTCAGTGTTATATTTG
CAGCATTCTCGAAAAAGTGCGCAGAGAGGTGGAATACAATGTCGGAAAAAGAAAAACAGC
GGTTCCATGAGATGGCTGAACAGGACAAGCATCGATTCGACTTGGAGATGCAGAACTATG
TACCACCAAAGGACATGAAGGTCAGAGGGCGAAAGAGGCAGCAGATGAAAGACCCTAATG
CACCAAAGCGCTCGCTATCAGCATTCTTTTTGTTTTGCAACGATGAACGTTCGAAGGTGA
AAGCTGGCAACCCAGAGTACACCATGGGCGATATTGCGAAGGAACTCGGCAGACGTTGGG
CGGCCGCTGATCCGGAGACTAAGGCTAAATATGACGCGCTATCTGAAAAAGACAAGGCGC
GATATGATAGGGAAATGACAGCGTACAAGAAAGGTCCGTTAGCTCAGCCGCCGCCACAGC
CGCCTGTCGTCCCCGCCATCGAGGACGAGGGCGGAGACTTCGATGCAGACGAAGAATACA
ATTGAAATAATGTGATCGCTGTCGATACAGCCTAAAATCAGGACAGAGAGATTTAACTCG
ATTTTGAAGATGAAAGTGCGCGACAGTCTTTCCCCCTTTTTCCAGCCAAATGTATAACGC
AATTGCTGTATACATTACTGATTTGTTTTGTTCATTATTCAGGGGATGATTTATTTTTGT
GCTGCGGGTTTGGGGAGCACTGGTTGATTGAGTTTAATAGAAATTGTAATCTTGTTTTTG
TTAGAGGGGGGGTCGTCGTCGTCATTCAAGGAAGGGTCGTAAATTTAAGAAGCGTTTTGA
CGTACGATCAGGTGTCAGAGAGGCTGGGTCTTTGAACGAAAGATTGAGGAGTGAATCTTC
TGTTCTGTAGCGTGTTATAGTTTTTACAAATTTAATTCTGATTCACAGATTTTACTTATA
CTTTCAAATACTCAAAATATTTTTGTACGATTTTTTGTTTGTCATCTGAGAAATGAGGTG
TCAAATAGTTTTATTTACAGCTTAAAAAAACGGCCAAACACCTATGTCGTTTTAAAAAAA
AAACCTCTAATTTTATGTATTCTTCAACAAATAAATGATTATCTTTAGTTCTCAGATGAC
GAATGTTGAACAGATTTTGAATGACAAAAATTTTAACATGAAAATGACTTTTAATTGTTG
CAAACTTTTGTAAACGAAACTGACGTTATTTTATGATCTTACGTTGACTGACAATGAAGA
AGCGAACAGTTGATTTTTTTTATTTTTCTTGATACGAATTTCTTCGAGATACAAGAAAAA
AGTAGACAATATGACAATTGGCAGTTAAAAAAAAATTGTCATTCTCCCGCCAAAATATCG
TACCATGAAAGTAAAATCAAAAAGTGTCATGGCGCCCAAAACATGTCTTGCGTCTACTTA
TGTCAACGGACACTGAAGGTCGGAAATGGTGTGGCCCTGTGGTTTAATAAAATCGTAATT
CAAGCAATATTATCAGGAACAAATCGATACAGACGTTTTCAGTATCACGTATAATGTAAG
TCAAAAAGTATTTCTTATTAAGTTAGCATAGACGTAAGGAGGTCGGGAGCGAATGTATTG
TTGTTGTTTTGTGTCGATTATGTATAGTTAAATTATATTCCTTTATTAAATATGTACTTT
TGTTTGATTTCGATATAATTTATAAATCGCGTTTAGTTAAAATATTAAGTTACGAAATTT
TATATTTTGTGAATTGTTTGTTTAGTGAGTCTGTCTCGCGCCATTTCTGTTTGATGCATG
CATACCAGCGATGTGTTTTTGTACATAAAACGACTGCAACCCGTGATAGTACTTAATAGT
AGCTGCGCTAGGTACTACAATATAGGTTATGTATATGATTTCTTCTGAAAAATTCAATTC
CAAATGAAATTAATTCGCTCATTGTTTTTCGTTTACTGTCTGATTGTTCGTTTGAAATCC
GTTTACGTTTTCAAAGAATATAATTTCAAGTATTTTGAAAGAATAAACGAATAGTCCTCT
TCTGATAAAACATACGAATGATGGTGTTCAAACCATTTGATATGCTAAGTTCTTTTTAAG
TGCATAATAATGCATAACTTGAAACACACGTGTCGGCGTCTTTACTCGGCAGAAGACTGT
TTAAATATCTTTTTCGAACGGACATTACCGTAAATATAATATGTATGTACCAGTTTTTTT
TAGATTATTAAAAAAAACACGATATTTTACCCCTCTTGTATAGTCAAAGCGATTAAGTTA
TTTTAAGTTGTATCGAAAAGGGCAATTGTTTTAAATTTGTAAAACGCTCACTGTACAAAA
AAAATATAGTGAATCCTTTACGCAAAAAAA
(3090 bp)

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