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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12709_c0_seq3
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:4.48 TPM:4.50
ORF EntryO_BomoSK11713_complete:A_BomoSK_comp12709_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTAATTTTAATAGATTTATTCGTATAAATCCCTGCATTTCTTAACGTATTCTT
ATATCGTAGCCCTATGCTTTCCCCCCACAGCGCACGAGAAGGCAGCGCGTTCGCAAACAA
AACACGACCAAGCGTCAAACGTCTTCGATCTAAACATAACATTCATTCGACCACACGACT
AGCCCACAAAATAATTTATTAAGGGGTTCCGTCGTAATCGCATTGAACCGTGTCCATTGC
TTCACGCACTCTGGACTATTTGCTGGCTTTGCAAGAAAAACAAGCAATGTAATCGACGCG
ACAGCCTGCCGGTTTGTGCAAAAAAATCGTTAACCGCCACGAAGCGCCATTATAATTTGG
TAGCCCCCCAAATCTAAATTTAAATGTATATACAAGATTCGAGTTTCGAATATCTGTTCT
TTTTTCTTTTCTTTTTTTCACATTATTTTTAATGAATTAAATTTAAAATTCACAACAATT
TATACACTGATGAACAACTATTTACGTAATATGTACATCGGAACCAAAGCTAACACTAAC
AAACTTAAAAATATCTAATTAGTATAAGCAACAAGTATCATGGTGATATTAAATGTATTT
ATTACAAATTAAAGTCAACGCCATAAGATTAGATGTTTTTTTAGCTCAAGTTAAGAGCTG
GTAAAAATGGTACATCAGTTCCGTCTCTCATGCTATCAAAGATATCAGAATTAACTTACA
AACAGCCAATCGGTGGCACACTATGTTCTTTTTCAATCCAAACTTTAGCATTTTAATTGA
AAACTTATACAAACTTCGTCTTTAGTAACATTCTTAGAACAACATATTCTTTTAATTTTA
TTTTAATATTCATTGAATACAAATGTATTTTAGAATGACATTAATATACAGAATACTACA
AAATGTTTAGTGTTTTAAACTTACACATGTTTTATTTAGACATGTTCAATATTAGGCATT
TAGACAAGTCTTATTTTGTTCAAACTCCAATTTGATTAGTATATTAATTTTGCACTTTAT
GAGAGTATTATAACATACAATTGCATTAGATTGCCTCTTTTATTTAAGCCCATATACGAA
GAGAGCAAATTTAATTTCTTTAGTAAACACTTAGGGTTCATTTCACAATTTCATTTTATT
CAAATACAGTATGTGTTTACGAGCGTGACGTTAATGAACCTTAAGGCTTTTTTCATGGCT
ACGATTCGTGAAAGCATCATACAAACTCACTGATCTCTTATTACTTGGGCAGTTATACTT
GGCAAGAGAGAACAAGGCACGGTAATAACAATAACGTGTGCGCTCAAAGAATACTGCGCA
ATGGAGGACTATGCTTTCAGATTTAACAAGTCAACTATTGCACACGCCACTTAGCAGTGT
TTGCTTGAATACAATTCTGCATAAATTCAGACGGTAAACGCACAGGTAATACGAAGTATT
TAATTACAGCAAGAAAACACAGTTGTCCCAATGTAGATGGAACATAAGGTAACTGATGAG
AGTTAACACGATTTTACATATAATGCATTTATAGTGGTACAATAGGAGCAATGTATGTAA
AAATATTTCAATGGTGTATTCAAAAAAGTAAGATCGCGTAAATTCTCTTTACAATATAAA
AATGTAATCACGAAATCGGATCCATAAAATCGAATTCGATTGTAAATAAAACAACAGTTC
TCTTTCAACCCTGCTTCGCGTAAGACTATTTGTGAAGCGATATTTTCGATTTTATGGTTC
TAATATCGAGATCATGTTCATTCGTTTTTAATTTTTGTATTTGACAGAAGTATATATACT
TCTATGATATGTATATACTTTTGTGATAAATAAAAAATAAAAAAACCTAATTAATGAATC
GTAGACACCAATATCTACTCAGAAATTGTTGTAATTCTTGTCTAATCCAAACCACCATAA
AACATAAATTTTAGATTGGATGCCATGGAGGGGCAAACATTTTGCAGATGATAAATAATT
TGGTACTATAATTTCTACAGTAATTTGTTTCAGCATAAATTTCAACTATTACAGAAAAAA
ACTTATTTAAAACTTATTTTGGTAATAGATAACTCTTCGGTTTTGTATTGTTTCCATCTT
TTAAAAGCATTCTTGACTTTCTTCTGTAAACCATTATTTTCTTATTCTTCTAAAAAGTTT
GTACACAAACATGTACTTCCTTAAAGTAATTCTCTTCACATAAACTGCATATCCATTGCC
GACTCAGACATACATTCCTCATTTTATGACCATTCACTTTGTTGTGTAGATTTTTTATTC
CAACACCAACAAAAACATTTTCAATTCCATATAATCTTCTGATAATTCTATAAAATATCT
CACTATTTCACTCTTTTCACTATTTACAAAGTTCTAATTTAAGCTCCAAATGTTTTTCAT
ATTCATTCACTTTACAAAGGCTTCAGGCGGTATCTTGCCTTCGGAGTGTAGTTGATTAAA
GATGAACATAGCCCTTTGCAAATCCCAGCCAGTTTCTTGAAGACAATTGATACTCCAATG
CTCATTCATTCCAGTTTGTTGACCAAGCATGTTGAGTAGCTGCATCTTCTGAGAATCATC
TGGCGTCCCAGCTGCGAGCGTGGGAGTAGGAGTAGGCGTGGGCGCTGGAGTAGGTGGAAT
CGGTTCTACAGTACCCGTTGAAAAGGCCTTATCCTCCTGTTCTTTAGTAGTATTCGTGAT
ATATAACATATCGTTGATGATTGAGAAGCCGCCATTCGCATTTGAAACTATCACGAACGT
CCGATGAAACGAACGCATCGGGTTATTGGGAGTGTTCGTTTCTTTGAACACACCGTTCAT
TGTAAGGACGATCATGGCCGGAGTAAAGACTAGTAAGTCGACAGCAAAACCCATTAAATC
GTGTGTTGTTTTTGGCAGATCTGATAGAAAGGAGACTACTTGCAGCTTTCCGGTACGTAG
GTAACGCCTTCTCGACTCCCTTTCTGTTATTCGGGTTAAATTACGGCTGTTCGATATGTA
AGAGTTTAACCTAGTTGTCGTAGAATTCCTGCTGTCATTAGTTAAATAATTTGCAGCCAT
CGACATTGTAGCATTTTCATGGTACGCCTCTAGAAGTGGTTGCCGAGATTCCGAGTCGTA
TATCGCATAGTATTGAGTGAGAAACTCCCTGACAAGATCCTGACCCGCCGGGTCTACCAG
GAACGATTGTTGCCGAGGGGGAAGTCCCATATCTTCAGCTACGTCGAATCCAATAGCCGG
TGGAAGATCCGCGCCATCCTAATTTTTTTTTAATTTTATGTTTATTTACAATGTTGAATC
AATAGGCGTGATGAGATTATATAAACTGCAACAAATAGTAAAGCATAAACATAAGTCGGA
AAATAAAAAAAAGACTTACCAATCTTGTCAGCTTGGGAAACTTCTTCCGGACATCA
(3416 bp)

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