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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12709_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:6.16 TPM:6.20
ORF EntryO_BomoSK11712_complete:A_BomoSK_comp12709_c0_seq2
Sequence
(Nucleotide)
TTTTTTTTTAATTTTAATAGATTTATTCGTATAAATCCCTGCATTTCTTAACGTATTCTT
ATATCGTAGCCCTATGCTTTCCCCCCACAGCGCACGAGAAGGCAGCGCGTTCGCAAACAA
AACACGACCAAGCGTCAAACGTCTTCGATCTAAACATAACATTCATTCGACCACACGACT
AGCCCACAAAATAATTTATTAAGGGGTTCCGTCGTAATCGCATTGAACCGTGTCCATTGC
TTCACGCACTCTGGACTATTTGCTGGCTTTGCAAGAAAAACAAGCAATGTAATCGACGCG
ACAGCCTGCCGGTTTGTGCAAAAAAATCGTTAACCGCCACGAAGCGCCATTATAATTTGG
TAGCCCCCCAAATCTAAATTTAAATGTATATACAAGATTCGAGTTTCGAATATCTGTTCT
TTTTTCTTTTCTTTTTTTCACATTATTTTTAATGAATTAAATTTAAAATTCACAACAATT
TATACACTGATGAACAACTATTTACGTAATATGTACATCGGAACCAAAGCTAACACTAAC
AAACTTAAAAATATCTAATTAGTATAAGCAACAAGTATCATGGTGATATTAAATGTATTT
ATTACAAATTAAAGTCAACGCCATAAGATTAGATGTTTTTTTAGCTCAAGTTAAGAGCTG
GTAAAAATGGTACATCAGTTCCGTCTCTCATGCTATCAAAGATATCAGAATTAACTTACA
AACAGCCAATCGGTGGCACACTATGTTCTTTTTCAATCCAAACTTTAGCATTTTAATTGA
AAACTTATACAAACTTCGTCTTTAGTAACATTCTTAGAACAACATATTCTTTTAATTTTA
TTTTAATATTCATTGAATACAAATGTATTTTAGAATGACATTAATATACAGAATACTACA
AAATGTTTAGTGTTTTAAACTTACACATGTTTTATTTAGACATGTTCAATATTAGGCATT
TAGACAAGTCTTATTTTGTTCAAACTCCAATTTGATTAGTATATTAATTTTGCACTTTAT
GAGAGTATTATAACATACAATTGCATTAGATTGCCTCTTTTATTTAAGCCCATATACGAA
GAGAGCAAATTTAATTTCTTTAGTAAACACTTAGGGTTCATTTCACAATTTCATTTTATT
CAAATACAGTATGTGTTTACGAGCGTGACGTTAATGAACCTTAAGGCTTTTTTCATGGCT
ACGATTCGTGAAAGCATCATACAAACTCACTGATCTCTTATTACTTGGGCAGTTATACTT
GGCAAGAGAGAACAAGGCACGGTAATAACAATAACGTGTGCGCTCAAAGAATACTGCGCA
ATGGAGGACTATGCTTTCAGATTTAACAAGTCAACTATTGCACACGCCACTTAGCAGTGT
TTGCTTGAATACAATTCTGCATAAATTCAGACGGTAAACGCACAGGTAATACGAAGTATT
TAATTACAGCAAGAAAACACAGTTGTCCCAATGTAGATGGAACATAAGGTAACTGATGAG
AGTTAACACGATTTTACATATAATGCATTTATAGTGGTACAATAGGAGCAATGTATGTAA
AAATATTTCAATGGTGTATTCAAAAAAGTAAGATCGCGTAAATTCTCTTTACAATATAAA
AATGTAATCACGAAATCGGATCCATAAAATCGAATTCGATTGTAAATAAAACAACAGTTC
TCTTTCAACCCTGCTTCGCGTAAGACTATTTGTGAAGCGATATTTTCGATTTTATGGTTC
TAATATCGAGATCATGTTCATTCGTTTTTAATTTTTGTATTTGACAGAAGTATATATACT
TCTATGATATGTATATACTTTTGTGATAAATAAAAAATAAAAAAACCTAATTAATGAATC
GTAGACACCAATATCTACTCAGAAATTGTTGTAATTCTTGTCTAATCCAAACCACCATAA
AACATAAATTTTAGATTGGATGCCATGGAGGGGCAAACATTTTGCAGATGATAAATAATT
TGGTACTATAATTTCTACAGTAATTTGTTTCAGCATAAATTTCAACTATTACAGAAAAAA
ACTTATTTAAAACTTATTTTGGTAATAGATAACTCTTCGGTTTTGTATTGTTTCCATCTT
TTAAAAGCATTCTTGACTTTCTTCTGTAAACCATTATTTTCTTATTCTTCTAAAAAGTTT
GTACACAAACATGTACTTCCTTAAAGTAATTCTCTTCACATAAACTGCATATCCATTGCC
GACTCAGACATACATTCCTCATTTTATGACCATTCACTTTGTTGTGTAGATTTTTTATTC
CAACACCAACAAAAACATTTTCAATTCCATATAATCTTCTGATAATTCTATAAAATATCT
CACTATTTCACTCTTTTCACTATTTACAAAGTTCTAATTTAAGCTCCAAATGTTTTTCAT
ATTCATTCACTTTACAAAGGCTTCAGGCGGTATCTTGCCTTCGGAGTGTAGTTGATTAAA
GATGAACATAGCCCTTTGCAAATCCCAGCCAGTTTCTTGAAGACAATTGATACTCCAATG
CTCATTCATTCCAGTTTGTTGACCAAGCATGTTGAGTAGCTGCATCTTCTGAGAATCATC
TGGCGTCCCAGCTGCGAGCGTGGGAGTAGGAGTAGGCGTGGGCGCTGGAGTAGGTGGAAT
CGGTTCTACAGTACCCGTTGAAAAGGCCTTATCCTCCTGTTCTTTAGTAGTATTCGTGAT
ATATAACATATCGTTGATGATTGAGAAGCCGCCATTCGCATTTGAAACTATCACGAACGT
CCGATGAAACGAACGCATCGGGTTATTGGGAGTGTTCGTTTCTTTGAACACACCGTTCAT
TGTAAGGACGATCATGGCCGGAGTAAAGACTAGTAAGTCGACAGCAAAACCCATTAAATC
GTGTGTTGTTTTTGGCAGATCTGATAGAAAGGAGACTACTTGCAGCTTTCCGGTACGTAG
GTAACGCCTTCTCGACTCCCTTTCTGTTATTCGGGTTAAATTACGGCTGTTCGATATGTA
AGAGTTTAACCTAGTTGTCGTAGAATTCCTGCTGTCATTAGTTAAATAATTTGCAGCCAT
CGACATTGTAGCATTTTCATGGTACGCCTCTAGAAGTGGTTGCCGAGATTCCGAGTCGTA
TATCGCATAGTATTGAGTGAGAAACTCCCTGACAAGATCCTGACCCGCCGGGTCTACCAG
GAACGATTGTTGCCGAGGGGGAAGTCCCATATCTTCAGCTACGTCGAATCCAATAGCCGG
TGGAAGATCCGCGCCATCCAATCTTGTCAGCTTGGGAAACTTCTTCCGGACATCACTTAT
GTAGATTTCGTGATCATGAAACCTGTTCACCAGTGGGTTTCCTTTGAGGTATAGCTCAAC
TAGCGGTAATGATCTGATTGGGTCCAGTGATCCAAGGAATGGAATCCTATTATCGCCCAT
ATACAATATTTTCAAATTCTTGAGCTTTGAAGACAAAACCTTGAGATGCTGCAAACCATG
AAGCTTATTATCATTTAGGTTCAAAGCTTCTATGTCTGGAATATTCTCTGCTATTATATC
TATAGCAGCCAACATTATCATTGGACGGAACAGTGCACAAAATATATCTTCTAGATCTGG
ATCAGCATGGAATTTTGTTAAATCTAATGCCTTAGTTGTAGCATTATACCTCTTCGCCAT
TGTCAATTTCATCTTCTCTTTCATGGCAGCGTCAATGGCCATGTTTGGAACAGCATTCCT
CACAATAACAATTAACTTAAAACCATCTGACATAGTGATCTTTCTATCAGCATTATAAAG
TTTTTCAGCTGTTTTGACATCATCAACATAGAATACTGCAGCATTTCCATTGACTTTATA
GTAATGTGGAATGAATATGTCGGGTGAAAGAAAACCCAACAAGGCTCGGAGGATAACATC
TTTTTCATGTTTTGCTCCATATGGAATGATTATTTGGTACCAAGGCAGTACACCAGGAAT
AAATTTCTTTTTAGTGTGTCCGTGGCTTCCTTGCGGAGCTGGAGAGTACATTCTCCCACG
TCCCCTGAAAGAACTTTTCCGGACCGGTCCTTGAAGAGCAGAACTACCCATGTCAATATC
ATCATCAAGGAGGGCTAAAGGATTTTTCCAAGTTCGAAATTTATTTTTTCCTTTAGCTCC
AGGTTTAAAACTGACATGTCTCGGCACACTATTGACACGGTCATCGTGTTCAAAATGGTC
AGTATCAGCCTTCCAATTTCTATTCCTTCCACCGCCACGTTTTGGCATCGTGTCGAAGAA
GCTTTAATCACCAGTATACAAATACCGTGAAAGTAGTTCTTTAAGGTTTCCTTATTTTCT
CACATGCGTGTAGAATAGTTAACTGAGATAAAGCCAATGATAATTGAATAATAGCTTTTT
TTAATTAACAACGCAAATTACAAAAGAGTTAAACAACTTTGATGGTGTAAAATTACCCTA
CACTCAATAAATTTTAAGTATGGTTAGTTAAATTATATATTTGGACGTTATTAGCAATCC
AAATATTTCCAAAATTAATCACCAAAAACTAAATAGCGTCTCTCTTGTGAATCTTAAACC
TGTTCTTTTTCAATGTGAAACAAAA
(4585 bp)

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