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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12709_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:3.26 TPM:3.28
ORF EntryO_BomoSK11711_complete:A_BomoSK_comp12709_c0_seq1
Sequence
(Nucleotide)
AAATTTAAACCTCAATATTGGAGGTAAAGAGGTAATATATACTATTTAAAAAATATATAC
ATATTAATATAATAATATATTTCTGTCAAAAATGATTCTTTGGAACTATTTTTAGATGAA
TTATTTAAAAAAACCTTTCCATCTATTTGCGATGCTCAAGTTAGTAATGATGGATATCAG
ATGTTATTTATGCCTCTAATATTGAGAATTATTTTGACAAAAAGGTTATACGGAGTGATA
GTACACAGGATGCAGGGTAACCTCAAATAAAATTAAAATAGTAAAGTAACAATAATGAGC
AATAGAATACCCAATTTCCTTAGTGAAGCCCAAGTACTAATAATTTTAATATAATTTCAT
AACAGCAATGTACAATGGGGATGAGTCTGATTTTAAATTATTCCACATATTTGATATTAT
GTCTCATACCACTGCACTAAAACTCTTCCAAGATTACTAAACAGTTGGGCCATTTTTACA
TATAATGCTGTGAGTGACCTATTCCTAGGTAAATATTTTTAAATGTTACTATTTTGTATC
AATTATTTTAATACTCTGATAAATATGTGAGTCAGGGGAATATGGAAATAAGAAGGCTCA
TTGTCTGTTGGGACATTTCCCAAGAAATTTTATGGAATTATCCTGCCAATTTTTTGCTAT
GTAAAATTATGTCTTTTAAAAAGATTAGTCAACTATAAGTATATTTTATTAAGGGATATT
TTACTGATTTTGTTATAAACAGTATAGGAATATAATATATGTTATCACAAATTTAACTTA
TGATAAAAAACATCTTTACTCATTTCATCTACTTAAACAAGCACAATTCAGCAACAGTAC
TGCCACAGTTTGATTTTATATAGCTGTCAAGTTTCCATGGCTTAACGCTAATGGTAAACT
GTGTTATAGGATATTCAAAATATCTTGGGGTGTGACCCCAAAGATACTGTCTACAACATT
AGCGTTACCTTATGTAGATTTCGTGATCATGAAACCTGTTCACCAGTGGGTTTCCTTTGA
GGTATAGCTCAACTAGCGGTAATGATCTGATTGGGTCCAGTGATCCAAGGAATGGAATCC
TATTATCGCCCATATACAATATTTTCAAATTCTTGAGCTTTGAAGACAAAACCTTGAGAT
GCTGCAAACCATGAAGCTTATTATCATTTAGGTTCAAAGCTTCTATGTCTGGAATATTCT
CTGCTATTATATCTATAGCAGCCAACATTATCATTGGACGGAACAGTGCACAAAATATAT
CTTCTAGATCTGGATCAGCATGGAATTTTGTTAAATCTAATGCCTTAGTTGTAGCATTAT
ACCTCTTCGCCATTGTCAATTTCATCTTCTCTTTCATGGCAGCGTCAATGGCCATGTTTG
GAACAGCATTCCTCACAATAACAATTAACTTAAAACCATCTGACATAGTGATCTTTCTAT
CAGCATTATAAAGTTTTTCAGCTGTTTTGACATCATCAACATAGAATACTGCAGCATTTC
CATTGACTTTATAGTAATGTGGAATGAATATGTCGGGTGAAAGAAAACCCAACAAGGCTC
GGAGGATAACATCTTTTTCATGTTTTGCTCCATATGGAATGATTATTTGGTACCAAGGCA
GTACACCAGGAATAAATTTCTTTTTAGTGTGTCCGTGGCTTCCTTGCGGAGCTGGAGAGT
ACATTCTCCCACGTCCCCTGAAAGAACTTTTCCGGACCGGTCCTTGAAGAGCAGAACTAC
CCATGTCAATATCATCATCAAGGAGGGCTAAAGGATTTTTCCAAGTTCGAAATTTATTTT
TTCCTTTAGCTCCAGGTTTAAAACTGACATGTCTCGGCACACTATTGACACGGTCATCGT
GTTCAAAATGGTCAGTATCAGCCTTCCAATTTCTATTCCTTCCACCGCCACGTTTTGGCA
TCGTGTCGAAGAAGCTTTAATCACCAGTATACAAATACCGTGAAAGTAGTTCTTTAAGGT
TTCCTTATTTTCTCACATGCGTGTAGAATAGTTAACTGAGATAAAGCCAATGATAATTGA
ATAATAGCTTTTTTTAATTAACAACGCAAATTACAAAAGAGTTAAACAACTTTGATGGTG
TAAAATTACCCTACACTCAATAAATTTTAAGTATGGTTAGTTAAATTATATATTTGGACG
TTATTAGCAATCCAAATATTTCCAAAATTAATCACCAAAAACTAAATAGCGTCTCTCTTG
TGAATCTTAAACCTGTTCTTTTTCAATGTGAAACAAAA
(2258 bp)

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