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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12707_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:11.89 TPM:11.96
ORF EntryO_BomoSK11708_complete:A_BomoSK_comp12707_c0_seq1
Sequence
(Nucleotide)
TGGGGGCATTTCATGTTTAATTTTTGCGACATATTTGTGACATAAAACTGAACTATTAGT
AAAAAATTCGGACTCTGTAGGTTTGAAAATAGTTTCTCATGTCTGGAATGTTAACAAGAG
CTCGCGCTTTCTCCACGGAAGCTCTAAAAGTTGTTAACAATGTTGCTAAGCAACAGTTTG
CTGTGTCAATAAAAGGAGAAGATGCTGTGATCAGCTATGAGAAGAAAGGCAAGGGGATAA
CCTTGATCCATACAAATGTGCCGCAGGCTTTTCAAGGAAAAGGAGTTGGGAAATTATTGG
CACAGTATGCCTTTGATCATGCTTTAGAAAACAGGTTGAATGTGATTTGCAAATGTCACT
TTTTAGCCAAATTCTACGAAGACAACATTAATAAATATAAGGTGCTAAATGTAAAACTTG
AATTAGAATAATTTAACCATGGATTTGGCTTGGCATAGATGTAATATTCATTATTATTTA
CGGGAAAAATACTATGGTAATGTTAAGAAAATTTCAAACGAAGCGTTGCAACAAAATCCT
AGGAACTCAGAATTTATTTTCTATACTGGAATTGCATTGATATTAGAAGGGCAAGTTCAT
AAAGGGATTTCTGAACTAACTCCGCTCCAATCAGACAGTGAGATACAATTGGCAGTGATC
ATTGCTCTAGTTTATGCATACAAAGTTTCTAATTTACCAGAAAAAGAGGTGTTGTTCAAT
TTAGAATCAAAATTGAAGGAAGAAAAGAAACATGCAAGCATAACTTCATATTACTATTCA
GCTTTGTTTTTATCATTAGCAGAAATAAATGAAAAAGCATCTGACTATTTAAATAAAGTA
TTTAGAAAAGATCCTAATAATTTAGATTCTATAATTCTGAAGGGATGGAATGACCTGGGC
TTGAGTCAGGAAAAATCACCGAAATCCACTATAGAATGTTTAGAAGCAGCTATCAGAAAA
AGTGATAACAGTATTGAAGCACTGCTTGGGTTGGCAAAATTGAAATATCTAGCAAAGGAC
TATGATGCATCAAATTTAACATTAGATAGACTGATTATTAACAACTCAGGGCAAGTAGTA
CCCCTTGTCGAGAAAATGAAAAATGAATTTGCAATGCAGAAATGGGAAGCGGTTTTCGAT
ACATTAGAAAGAATATTTTCTATAGATCCAGATAATGTTGAGGGCTTGAAAATGAGAATA
TATCTTGCACTTGGTAAACGATCTGATTATATAGAAGCAGCTGATCAATTGAACCGCTTT
TTTGGTATACTCGAAATTGAAGAAAGCCATAATGGACATCAGTTTTACTATACTGCTCAA
ATCTTTTCTAGAATTTGTGGGAGGTCAAGTGCAGTTTTGTCTCAAGCTTATAGATTTGCC
CAGTATGCTTCAGAAATGTATTCAAATAATGTTGACTATCTCAGTGAAGTTGGCTACCAG
TGTATCCTTCAGGCAAAATATAAAGACGCACTGAGTTTCTTTAGAGCTGCAAGTAAATTG
GACAATAATTCCATCACAGCACTCTGTGGATTGACTCTCTGCCAAATGTTAGAGAATGGT
CCGACAGACCAAATAACCCAACAAATTGAATTACTTTTTGAGATGCAAGGAACAGAAAAG
TTACCACTTCTATACTTGTTGTCTGCCCAACTAAATATCAAGAACTCATCTAATGCAGTA
CCATTGTTAAACACAGCCTTTGAAACAAAATTAAATTTAGCCTCTCGCAATCCCATGAGT
TTAATTTACATTAAGGACTTAGACCCAGATTTTGTTTTAGAAATTTACAAAGAGTACAAA
AAGCATTTACCAAAGAAGCCGTTTATTATCATTGGGTATCTGCTTTATTCTCAAGAAGGA
AACATCCCTGTTGTAATCCAGTGTTTTAAAATCTTAAATGCTGTTTGTGAAGCTTGCTCA
GGTTTGATACCAGGCTTATTTGAATTGGCTAAATTGAAATTTCTTTTCGGATATGCCATT
GAAGCTGAAAAAATAGCTCAACAAATCGCTGAGTTGGACAATACACATGCTGGTAGTCAG
ATTTTACTATCACAAATTTATATACAACAGCAAGAATATGTTAAAGCTGAACAATGTTTA
GAAATTTGTCTGAGTTACAATTTCAAAGTCAGAGATAGTGCAATGTACCATTTTATAAAT
GCAATAGTTTTAAAAAGCAAAGAAAAATTACAAGATGCTTTGTCAAGCTTCTTGACAAGT
CTTCAGATAGCAACTAGTAAAAGCAACATGAGCAGAACATTCGATTCAGACTTGAACATT
ATTGATAAAGCTACTTTGTATCTACAAATCATTGAGATACACACAGCTTTAGGGCAAATT
GGGGAAGCGGGCAAAGCCATGCAGGAAGCAATTCAAGAATTTTCATATACATCAGAAGAA
ACTCGGCTGTTAATATCACGTGCTGACTTGGCTCTGAATCAAGGGGATATTGACAGTGCA
ATTGACATCTTAAATGAAATAAAGCCCGGACAGCCATATTACTTTCAAGCCCACAGCAAA
CTGGCTCATATTTATTTGAAAAATAAAAAAGACAGAGCCATGTTCACAACATGTTTTAAA
GAGATTGTCAGTAATCATCCAATGACAGATGCCCATACGATGATGGGAGATGCTTTTATG
TCGATTCAAGATCCAGCACAAGCGGTGGAGTCATACGAGACCGCCCTGAGAGGCAACCTC
GGGGACCTACAGCTCACTAAGAAACTCGGCGCAGCTTTGTTCAAGATGCACGAATACGAC
AAGGCCGTGCAGCACTATGAGAACGCGATGAAAACGTTCAACGACGACGAACTTAAATTT
GAATATCTCGATCTACTCGTCAGATTAAAACAATACGATAAAGCGGACACTACTATATCT
TCGGAGCTGAATCAGGTGTACAATAAAGAGAAAGACATCGGAACACTGAGGCGCCGTGTC
CGATTGCTACTTAAGCAGGCGAAATGTAGAGAACTGAAAACTCCGACTCCGGGAAACGTC
AATTTAATATTAGCCGAAGCAAAAGAATTGCAGTTATCGATCGTCAAAAGACTAGAGATA
GACTCGAAGACGGATCTGCAGGAGGAGAGGAGGCAGCTTTCGAACATATTGTGCGCTTTG
GCGAAGTTCAAAAGCATGAGGGAGCCGGCTGTCGCGGCTAATTTGTATTCTGAGGCCCTA
ATTCATACTCCCCGCGAGCCGAGCACGCTGCTGGCCCTAGCTAAGCTGTACGCGCAGATG
AATAATCCAGAAAAGTGCGAGCAAACTTGTGCAGTTTTATTGAACGCAGATCCGAATAAT
GAATCTGCGGCAGTCATGATGGCAGACCTGGCGTTTCGTAAGGTGGATCTAGAAACAGCC
CAACGGCATCTGAACCAGATCTTATCGGTGAAGCCGACGAGCTGGGAGGCTCTCGCGCAG
CTTGTCGAGGTGCAGTGGAGACGCGGGAAACTCAGCGAAGCCGAACAGGCCTTGGAACTC
GCCAAGCAACACCTCGACGATCCGGACGACCCGGGCTACAAGTACTGCGCGGGCGTGTGC
GCGGCGTACGGCGGCAAGTGCAACGCGGCGCTGCG
(3575 bp)

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