SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12701_c0_seq3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106134085_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:5.40 TPM:5.43
ORF EntryO_BomoSK11689_5prime_partial:A_BomoSK_comp12701_c0_seq3
Sequence
(Nucleotide)
TCTCTTTTTATGTCTATTGTGGCTGAATCAGCAAAATAAACTCTAAAACCTTTTACATTT
TCATCATAACCGACAAAACAACCCTTTTTACTTTTAGAGTCCCACTTTCTTCTTAGGTTT
TTCGGTATATGCACATACACATTTTGACCAAACACTTTTAAGTTATCCAAATTAGTATAA
GCCTTTTTAAACCATAATTCAAAAGGTGACTTGCCTTTCTCATGACTGTGTCCTGTTCTG
TTCAGAATATAGACAGCAGTGTTGACTGCTTCAGCCCACAACTCTTTGGGTAATTTTGCA
CTTATTATCATAGCTCGAGCTGCCTCCACAACTGTCCTATTGTCTCTTTCTATTTTACCA
TTTTGTTCTGGTGTATATGCTGTAGACGTCTGGTGCCTTATGCCTTTTCCCTTAAATAAC
TCTTTAACTGTTGCATTAATAAATTCACTTCCATTATCAGTTCTTACAACTTTTACCTTT
GCATCTGTATCTTGTTCAGCCAAATTTATAAACTCTTTAATCTTGTCAGGGACTTCACTC
TTTTGTTTTAGGAAATATACAAATCTGTAAGTGGAATAATCATCTCTCATTAATAAAAAA
TATTTAGAACCTCCCAAGGACTCAACCTCCATAGGTCCACAAACATCCATGTGTATTAAC
TGACATGGGCTCTTTGAAATAGTATCACTTCTCTGAAACGGTAGTCTGTGCATTTTACCT
TCCATACAAGCATTGCATATTACTATATCGTTTTTATATTTAATTCCATTTTTATTTAAG
AACTCCTTGACATACTGAAAGTTTTGGTGCCCTAGGCGCTCATGCCAGATCTGTAAGCTT
TCTACTGCTATGGCTACATTAGCAATAGGATTAGAATCATAACTGAAACACATGACATAC
AATTTGTTCTCTCTATACCCTGTTGCCACAACTTTTCTTTCCTTATTCTTTATCTCACAA
TGATCTTTTTCAAATTCCATTTTATATCCTCTGTCTATGACACTTCTTACAGCAAATAAA
TTAATTGTCAGTTTGGGAACATACAACACATTATGCAGAGTGGTATCAATCCATTCCTGT
CCATCAAAAGCTTTAAGGATCACTTTTCCTTTACCAATAACCTGTAGTTCTCTGCCATCA
CCAACTATTACTGACTGGTAAGATTCATACTCTTCAAAATCACAAAATAAACTTCTCTGA
AAACACATATGTTCGCTTGCACCGGTGTCAACCAACCAGCCTTGGGTACTTTCTTTGCTC
TTCATAATTGTTGTGAATGCATTAATCTTTTTGTTTGACTCAGTACCTTTACTAACATCT
CTGCTTTTCTCTTTATTTAGCCGTAGTCTGCAAATTTTAATGGAATGGCCATATTTTTTA
CAGTAAAAACATTGCAACTTAGCTCGACAATCCTTTTTATAATGGCCCATCTTGCCACAA
CCAAAACACTTTATTTCGTTAAATTTCTTAGTAGTTGTTGCAAGTGCTACACACTCTGTA
TCTAACTTAGCTTCACTAGTTGTTGAGACAGACATATTGCGTTCTTCCTCAATCAACAAT
CTTGCCATTAGTTCTCCTACAGTTTGATTTTCTGTAGGGACTGATTCCCAAGCTGCGATA
AAATGGCGATATTTTTCTGGTAATGACATAAGTACCTTGGTGATAACCATCTTGTCAGAT
ATATCATCGCCTAACTGGCGAATATTAGCTCTTACCTCTTCTATTTTTGAGAAAAATAGG
GAAACATCAGTATCGCATTTGAGCGAATAAAACTTCTGTTGCTCAAGGTGCAAGGATGTT
GACGATTTCTTTTCATAGATATTATTTAATTTCGTCCACATCTCGGCAGACGTAGTGGCA
GTAAGTAGATGTGTCATTATACTCTGTTCAATATGGAAAACAATCCAACCTTGTGCCTTA
CTATCTTTTGAAATCCAATCCTGGTACTCCGTCGATTTATCATTACGGGGTTTAGGTATG
GAACCATCCACGATCTCAAATAGGCCTTTGGCCTTTAGAATAACCCTCATCTGAAATTTC
CAGGTGCACCATGTCGCACTTCCATTTAACTTTACTCCAGAAATTGATTGCGGTTGAGAC
AGATCCATTTTCGTCCACTCTTACGATGACCGGCGAATTTAAACAAAAATGGCGTCCGAT
GGCGTCTCAAAATCTCAACACGGCCAACACAGCCAACGAAAATTTCACACAAGATGTTTG
TTCTCACCGTAATGTATGCAGTGGTGTATTCTGGGCTCATAACCTGTGATGAGTTATGGG
CTTGTATAATGTTTTTGATGGTAAAAGTTATTAAAACTCGGTGGAGAAAATAATCACGTC
GTTCTTTTATTAATTTATAACCTCAAAGAGTTACAATCATAGATTAAACATAAACATGAG
TTATTGTGCCACAGACAACTAATTTTTATATTTATTGGCGACTACATTTCACACGCCCCC
TCAATAAAATAAAAATTACTCTCATTAACAAAAAAAATTTTAGCTCTAACAAACAACACA
TGCGCCCCCTTAATGGTAGACTGCTAATACTAATACAAAGAAGGTCTCTTATTTAGATCT
TATTCTATGGTTATTCTTAACTTATAAATATTAATTAAAACATATTTAACATTCCCTCAC
ATTAAACCTAATAGATCTCTAAAGTTATTAAATTTACTCACAGGTAAAGACTTTGTAAAG
AAATCAGCTAATTGACAATCTGTTTTAACAAATTTCAGAACTACAATATTACTGTCAATT
TTCTCTTTAATAAAATTAAACTTAATATCGACATGTTTTACTCTTTTATTATTTTCAGGA
TTATTTCCAATACTTATGGCTGCCTGATTATCTACAAAGATAGTGATAGGACAAACAGAA
ATTTCAAAATCTTTTAAAATATTTTTAAGCCAACAAGCCTCAACAACTGCAGAACTCAGA
GCTTTTAGTTCTGCCTCAGAAGATGACAAACTAACAGTAGATTGCTTCCTCGATGACCAC
ATAATAGGACAATTAAATAATTTAAACACATATCCTGATGTTGACTTTCTGTCATTAATA
TCGCTACCCCAGTCGGAATCAACATATCCAATCAAATCAGTACTTTCATTACTATTGAAA
GTCAGCTTTAGGTCAAGTGTTGCATTTACATATCTAAGCACTCTTTTTAGAGCTTTTAAC
AGTGCTTCATTTGCACAATTTTGAAAACGACTTAAATATGCTACACTAGGACATAAATCA
GGTCTAGTACATAAGACAGCATACATTAAAGATCCAAGAATTTGTCTACATTTATTTTCT
AACTTAGGATCTGAGTTATTTGACTGAAACATCTGAAATTTAAATTCCATTGGGGTAGAC
ATAGGTTTTGACTCGCACATATTGAATTTCTTTAAAATTTGTCTTAAGTAATGGTTTTGT
GACATTTTAATAATACCATTTTGCAAATCTTGCTCAACATGAATACCTAAATAGTTAGTT
ACATGACCTAGGTCTTTCATAGAGAAAATA
(3510 bp)

- SilkBase 1999-2023 -