SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12701_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		gag-pol_polyprotein_[Lasius_niger]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.32 TPM:2.33
ORF EntryO_BomoSK11687_3prime_partial:A_BomoSK_comp12701_c0_seq2
Sequence
(Nucleotide)
TCTCTTTTTATGTCTATTGTGGCTGAATCAGCAAAATAAACTCTAAAACCTTTTACATTT
TCATCATAACAGATGTTATTTTTGAGTCACCTAAAAATGAAGAAATATTCAGTGAAATAC
TAAATGACACCTTTGAAGAAGAAATGAAAGAAAATGTAAATGATGAAGAGGAAGAATATT
ATACAGATACATCTAGTGATACAGAAGAAAATGGAAGAGAAGAAAAGAAAGAGTTACCAG
AAAAGAGAGAAAAGAGAAAACCTATCTGGTTACAAGATTATGTCACAGAAACTAGCTTTA
TGTGTATATTAAATGAACCTAAAACTTATAATGAAGCTATTAACAGTGAGAGTAGTGAAG
AGTGGAAAGAAGCCATGAAAAAGGAATTGGAAGTTCTAAAAGAAAATGATACCTGGAATA
GTGAAATAAAAGTACCTAAAGAAAAGAGAGTAATAGATAGCAAATGGGTCTATAAAATAA
AACAAGACAGTAAAGGTAACATAACCCAGTACAAGGCACGATTGGTTGCCAGAGGTTTTC
AACAGGAAGACATATTTGAAGCCTATGATGTGTATGCACCAGTAGCTAAAATTTCTACTT
TCAAGATTTTAATGGCTTTGGCTAGTAAAATGAAATTACCAGTTCATCACATGGATGTAA
GGAGTGCTTTCCTGTATGGAGATATACAGGAAGATGTTTATATGAGACTACCACCTGGAT
GTGATGACAATGTAAGTGTTGTGAAATTAAACAAAAGTATATATGGACTAAAGAAATCAC
CCAAGTACTGGAATTTAAAGTTTGATAAAGTTATTGCTAAGAAAGGGTTTAGTAGATCTG
AAAATGATTTTTGTCTTTATTGTAAAGTAAATTGTGAATATAAAATTTATTTGTTATTGT
TTGTCGATGACATATTGATTATGGGGACTAATGATAAGGTGGTACATAATTTAAAACTTT
ATTTGAGTAATATTTTCTCTATGAAAGACCTAGGT
(995 bp)

- SilkBase 1999-2023 -