SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12689_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_putative_RNA-binding_protein_15_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:12.21 TPM:12.29
ORF EntryO_BomoSK11659_complete:A_BomoSK_comp12689_c0_seq1
Sequence
(Nucleotide)
GCCGCGGGAGATTCCCATGTAATGGTCGATATTCTTGATGCTTATCAGCGCTTCTAATTT
CAAATTTACATTAAATAAAGTTGAAGTGAACGTGATTATTTTAAAATAATTGTCTACTTA
ATAATACGAATTAGTTCGTCCAAGATTGAGGTTTTCAGTGATCTGCTGAGTGATTAGTGT
TTGTAATTCGTTTGGGATAGTAGTTCGTCGAAGTGAGCTTTCATGATTGGATTACCGCGT
AGCGATAGAGATAGAGATCGAATTACGGTGAAAATTCGCAATATGAAGCGAAGTTCGTCG
CGTGATAGTATGCCGCGATCAAAACGGACACGCAGCAGTATTGGTAGGTATGACGATAGC
TCTGACGAGCGTGGAAGCCCGGAACGAGTACGACGTCGAGTACGCTCCCCTAGCCCGCGC
GGTCGATATGTGTCACCTCATCGCGATGATTACGTGCGTTCTCGTGATGCTCGAGATGAA
TCTGTCCGCAGCTACTACAAAGTACTATGTGTTAGTGCTTTACACCCTAAAGCGTCGGAT
GAGATTGTCAAGGATACTTTGTATAGAGAATATAAGAAGTATGGTGACTTTAGTATAAAA
ATATCCCATGAGTTGGATGAGAGAGTAGCCTACATCTGCTTCCGAAGTGCAGAGGATGCG
AGAGACGCTAAACATGCCAAGCCTAGGATAATACTGTATGATAAAGTTGCTATTGTTGAT
CCTGTTTATGAACCTGTACGTTCTGAGTACAGACCGAGGCCTCGTAGTATAACTCCTCCT
GACTATGATCGCCCTTATTCATACGCTTGGTCTCCTGTACCAGAGAGACGTCGTCCCCCT
CCTGATGAGAGAGCCTATGGTATCCCTCCTACAGTGCCACCTCACCATAGAGATTTCCGC
CCTCCTATGCATGAGTATCCCATGGCAGGTCCTCATGGGCCTCCAATGCATCACAGACCA
CCTATGCATCACCCTCCACATCCCCATTATATGCCACGTCCATACATGCCCCGGCCTCAC
CATCCTCCATTTGAGAAAATTGAGAACAAAAAAGATAAATTTCCAAATTACCTACACCAT
GTTCAACCTGAAGATGATCCATTAGCTACAAGAACTCTTTTCGCTGGTAATTTAGAAATA
AACATTTCTGATGAAGAGTTACGCCGAATTTTTGGACGCTATGGTATAGTAGAGGACATT
GACATTAAAAGACCTCCTCCAGGTACTGGAAATGCTTTTGCATTTGTTCGTTATCAAACT
TTGGACATGGCACACAGAGCCAAAGTTGAATTATCAGGCCAATACATTGGCAAATTTCAA
TGTAAAATAGGTTATGGCAAAGCTACACCCACAACACGTGTCTGGGTGGGTGGCCTGGGA
CCATGGACTTCAGTAGCACAGTTAGAGAGAGAATTTGATAGGTTTGGTGCCATTAAAAAG
ATTGAATATGTGAAGGGTGAACCTCATGCCTATATTTTATATGACTCTATTGATGCAGCC
CAAGCTGCTGTCAAAGAAATGCGGGGCTTTCCTTTAGGGGGACCGGAGCGACGTTTGCGT
ATTGATTTCGCAGACGTTGGAACAGGTGGACCCTATAGACCTAAACCTTACAGTGCACCT
GTTGGTGAAGATGGTAGGCCTGTTGAAGGATATGAGGGATATGAAGGTAGTTCTTGGGAG
GATGGTTATAGCTATGGTACTTATAGGGGTAGAGGTGGGCATCGTGGCCGTGGACGTGGC
TCCTACAGAGGTGTCTATCATGGTACAGGAGATTATCGTGACGAAGAATGGAGACGTGCT
CCATTAGATTCAGAATATGAGAGTCGCTTGCGTCGTTCTGGATCAAGGGAGCCTGGAGTC
GATAGGTCACGCTCACGATCTCGTCGTAGATCACCTGATAGTGACTCTGATGGATCAATG
CGTAGAAGTAGTGGGATGCTATCTTCGTCACGAACAATGGCAGAATTAGTTCGTAAAGCA
ACTACAATTTGGCATGGAGCACTGATTCTCAAAAATTCATTGTTTCCTACTAAGTTGCAT
TTAACAGACGGTGACTCTGAAATTATTGATAGTCTCATGAAAGATGAAGATGGTAGAAAA
CAGCTCAGAATCACACAAAGATTACGTTTGGATCAACCTAAGTTAGATGATGTTCAAAAA
CGTATTGCCACATCTAGCTCTCATGCCATTTTTGTGGGTGTGTCTGGTTCTACTGCTGTA
GTCACCAATGAAGATGTTTCGATACAAACACGACCAATGAGGAATTTGGTATCATATCTT
AAACAAAAAGAAGCAGCAGGTGTGATATCACTTTTGAACAAAGAGACTGAAGCTACTGGA
GTTCTTTATTCTTTCCCTCCATGTGAATTTTCAACTGACCTTCTCAAAAGAACGTGTCAC
AATTTAACTGAAGAGAGTTTTAAGGAAGATCACCTAGTTATAGTAGTAGTACGAGGTGGC
ACTGCTTAATTATTCAAACACTGCTTTAGTATATTGTATTGTTATTTGTAGGTATATACT
CTTAATTTAAGTTTTTTGTTCTACACTTTTTACTTTATATTCTTGTGATGTGTGTGATGT
GAGGTGCATAAGATGTGCAAGTTTAAATATTTGTGCAGTGCTGTGTTCTCACAGTGATCA
GAATTAACTTTGATGAAAATGTACAGTATAGAAGCTAGTTCAGCTAGATATCCGACTAAA
AGAAGTTTATCTTACTTTTTTAAAGTTAAGTGTATAATATTCAGTGTATGATTTAGGTGA
TGTGTAGTGTGTGAACAAAACAAATAGATTATTTTAATTTTGAAAGTTGTTTTTTTAAAC
CTTGTGATTAAGTGACATATCCAGTGCAGTTGATCCATTAGTGGTTTTGTGATGTTAAGG
TGTTCCAAAAAAAAAAGTATTGTGAATTTATGTTTTGGTATGTCCATTAATTTGCAAAAA
AATGATTATAAAAGGATGTACAGTGGAACAACAAGTCAGTGGTGTGTTGTGGTTTTAACA
GTAAAATTACCAAATTTAGAGTCAATTGAAGACAAATTTTCTACAATTTACAAATATGGT
GATATAAATGTTGACTCAGTATTGTTTGTGATTTGACGTGTTTCATATTATAATATAAAA
CTGAAACTGGGTAAGTCTGTAGATATATTTCACACAACACAGTAGGCACTGTATTGGTAA
TTTGTGTGTACTTTAAAAATAGTTCTTTACAATTCTGAACTTTATAGAATTTTTTTAATG
CTTACAGTTGTATGGTACATAAAAAATAAAAAATCCCATGCACTAAATGAGCTAAGGTAT
AATGTAATATAAATGTGATTCATTAATACGAAAAAAAAGGAAAATTACCTAAATTACTAT
TATCATTAATATTATAATATCATTATCATTATAATTACTATTGCATTACCTAAAT
(3415 bp)

- SilkBase 1999-2023 -