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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12654_c0_seq2
Scaffold_idBomo_Scaf018
NCBI non-redundant
(nr)		PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008298 P intracellular mRNA localization
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.83 TPM:0.84
ORF EntryO_BomoSK11557_complete:A_BomoSK_comp12654_c0_seq2
Sequence
(Nucleotide)
GTCGCGCAGGGCTCGGCGCAGGTACCGCAGAGCCGCCCGGGCCGCGTCCGCGCGCGAGTG
TCCGCTGAAGGCTAGAGCCGGGGCCGCATCTAGCTTCAGCACGTGGAGCGGGTCGAGGGT
CTCCCAGCACGTCTGCAGCTCCAGCGCCGCGGCCGCGCGCTCAGCCGCCTCCTCTATGTC
GTCCGTCTCGGATAGCACGGCTCGAGCCGCCATGCGTTTTTCGGGATCCGTGTGCGAGAT
GAGGCCGTAATGGTACTCGGAGACGCGCTGGCCGAGGTCCGGCTTCCAGGGCGCGGGAGT
GGTCTCCACCAACCGCTCCATGGCGCGCTCGTGGGCTCGCACCAGCGCTTGTTCCTCAAC
GAAATCATGAGTGAGACGCGAGAGGTTTTCACGCAGGAACAAGTAGAGGTCGGCTGCGGC
TTTTTGTCGCGCCTGTCGCTTGGTGGTGCCGCTGGCGTCGCGCGAGTGCAGGCCGATGCT
GGCGCGCACGCTGAACAGGCGCATGTGCGCGGGCCCAGTGTCCGCCACCAGCGCGTACTC
CACGCCCGGCAGCTTGTACTCCTCGCACAGCTCCTTCAGCAGCGCCACATAGCTGCGACT
GTCCACTGTGGGCGCTTTGCCCTCGGAGCACTCGCCAGCCGATTGGTTACTATGAGAGGG
TTGTGTAAATTCAGTAGCAAATGGTGGGGGTACACGGTGACCTATTGTAGAAAGACACAA
CAGCATGGCACGGGCTGCTTCCTGCTTTGCTTCCCTCTTTGATCGTGCAGAAGCAGAGAC
AGACTCACCTAAAGCCTTACAGCGGAACTCAAATGTGGCCTGGTGTTGGGGCCCTGACTG
TGGGAATATCACGACATTCAGAAATTAAATTATTTGTCTTGTTAACTGCCAAACATCAAA
TTATGCTTTATTAAGATAATATTATGCTTCTCTCAATACTCCCATCTAGTCATACCTTTA
CCACTTTTGAAAATAAATGTACATTTCAGGCTTAAAAAATATGTGTATATTTTTGCAGCA
AAGCATATTCCCTTTAAATGCAGACCATAAATTTCATCTAATGGAAAATGGTGTATGAGT
GTTCTGTGCAAGTATGACATGATTGTGTATATCATTTTAAGCAGCACACCTGCTGCAACT
TTTTATTCAAAATTTGAGAAGACCTTTCAGAGGCAGGCAGTTGCTAGTCTGTGCTCTGGG
AATTGCTGATTTCCCAGAACTACTGTGACCAGTCACTATAAGGTTAATTGTTTGCCCATC
TGTCTACAAAATAACACCAATTTAAGGTGAGGTTCAATTTTAATTACCCACATTCATACC
TGAGCAACACATTCATACTCTGGAATCTGTCCAAGTTTCATCATCATTTCTTGCAGTACT
GTTATGGGAGTTTTCATCTTGTTGTTAGATTTTTAAAGCTTAAAACTGGAACAGTAAAAG
CTGTAATTTTAATAATGTACCCTTATTAATTTTGTTTGTAAATAAGACCTTGAGGTCGAT
ATTCCGCATATTTTGGCTAAACACTATCTCTAATGAAGATCTCTGGACTGAATGTGACCA
GGTCCCCATCGTGCAAGACATTGCCAACTGGAAATAGCGTTGGATAGGCCACACGACGGA
GCAGCAGAATCAATGCAGCATCGATCGCGTTTGAGGGGCCACTGCGTAGTAGGTGAAGAT
CTGGTGGCACATTTGTATACACATTGGCGACACACCGTTGAGAGCAAGATGAGAACTGCC
GGCATGACCTGGAGTTATCGTAAGGAGCTGGCGCAAGGCAGGGTCAAGTGGAGACAACTT
GTGAGGGGCCTATGTACCAGCTGGGTACCCTAGGTCTACAACAATAAAACCCTGTAGTCT
ATACATACATACTTTTTGATAATAATTATGAAGATTATTATTGTTATGTAGGTTGCAAGT
TTTCTCTTGAGCCTTTTGGCGTCACATTTTTGCATTATAACACAAACATATTGGAATATT
TAATTAAATTAATAATGATTTTGATCAATAACAAT
(2015 bp)

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