SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12637_c0_seq7
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_kinase_PRP4_homolog_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
Transcript
Level		FPKM:10.06 TPM:10.12
ORF EntryO_BomoSK11512_complete:A_BomoSK_comp12637_c0_seq7
Sequence
(Nucleotide)
AAAGAAATGGCAGAATTGACATTGAAAAATGACCGAACACGGCTACCGCTAAAGTTTAGC
TCGTTTTATGAGCTTTACAAACGTTTCTTAAAAGATCACGGCTGTAAGTGGCACGATGTT
TCTAAACTCTTATCGGTTGTCGCGGAGATACTTTTCGATGTCGACGGTACATGTAGCAAG
ATTTTAGGAAAGGTCAGTACTTAATGAGATCTCAAATTTTTAAGATTTTCTGATGCTAAC
CGCCATTTCAATAAGCAAAAAAAGTTCCGTGCTAGAAAACTGTGAACGGAGGCCGAGTAC
CCGACTTTTAATAAAGACCTTCTTTACCTGCTCATCCCTTATTTTAAACACAATGTACCC
AAAGGAACTGCATTTCGAACAGCTGTGTGTTCAGTAGAAATTCCACATTCTTGTCTCAAA
CGCGTGTGTAATACTAGCATTTTCTATGAAATAATAATAGAATACTGCATTAATTGTACA
TAAACATCGGTCGTTTTATTATGCATTTATAATAAATCAGTGTTTTCTTGATATAATATT
GCATCACTCATTTCTAATTTCAGTAGACCAAGTTGTGTAAATTACAAATGAAACCGTACA
TTTTCTTTCAAGTGTTAGAAAATTTTTTTGAATTTAACTATCCACTATTGCCAGACTATG
ATTTTCCGGTATGTACTGATAAATGAAAAAAAAAATTGTCACGAAAAACACTACTAGCTA
TGACACAAGTGTAAGACCGTGTACTAACATTCAGCGTACGTTAACCTCAATAACATATTT
TAATTTTATTACATTGAATGATATTTCGAAACGCTTAAGTAAACAAGCAAAGTGGAAAAC
AAAATGTTTACACAGTTTTGTTACGTTGCTGCACTAACGAAAATAATCGTTAAGCATGTA
TGTGCTATTTTCTGTGCAACCATTGAAATATTTCAAAATTTCAGTACCTAAATCTAATGT
TAAAGTCGTAGAATATCGATTAGTTTGAACGGCCCTTAATAAAGATAGATATCGTCACTT
AAGGTATTCAGTTATTTTTATTACATAAAGTAAAAACAGAGATTTTATTATTGTTCAAAT
GATACGCGTGTACTAGTAAATATCTAACAATCTCGCAGTCAAGCAGAAATAAACTCATTT
ACAAAAAGATAAGCGCGAGGTGGCGGCACGCGCAGCAGGCATGTTAGTGTGTGACGTTTT
ATCAACAAATCTCCGATGTAACGCCCGCATCCGTTGACAATCAGCCGGTCGTTCTTCAAA
CAAATAACAGTTTTGTCAATAATTGCTAAGTCAATGAATGAATAAATAGTTTCGGCGTGA
TCGAAAAATGTCTCAGAATAAAGATACGTTAGATGTGCGCAAACAAAGCATCGCGAACGT
TCGTTGCGTAGAACCGGTATTGTTCTTCTAACCCAATTACCTAGCTAAATACCGGGCTAG
GACTCGCCACTCACGGTCCGAACTCCGTCGCCTTCATCTATATACCCAGTTACACAGCCA
AGACATTTGTCAATAATTTCCGCGCTTGAAGAATTATTTTAAAACTGTACTGTCCTGCAG
TTACCCACTGCTAATATATTGTACACGTCAAAGTAATGTTGAAAGAATCAGACTTAATCT
ATTTTGTAAACATTTGCATTGTTTTAGTTTTTTACTACGATGATGATATTTTAAAAGTTA
AAATGTATTCTTGTGCACAAAAGTGCAGAATAATTTTAGTGGCAACTTGACAAACAAAAT
AGTTTCGTGAAGGTGTGTTCATTAAAAATAAGATAGGAAATGTAGTACGTAATGCGAAGA
AAAGCTCCTGTGTCGGGCACCTCGGAGTGCGCGGGAGGGCGCTCCCACGGGTTGCCGATA
TTTTTAGTCCACGACCATTACTTGGCACCGACGGCCGCGCTCGCTTGCGCTAGTGATCTT
TTTGAAATTTGTTCGGTTCGCGCCTAGGTACGCTCTGAATCTCTAGATAGACCCAGTCTG
GGACCGCTAGTGAACAATGAGTGCCGCAAGCTGGGAATAGTGAAAATGAAATCATTATGT
AGTGTGTAATCACTGTTTGAAAATTATGACGGTTGCAGGATACTACGTGACTTATCCTAG
TTTAAAGAGTGTTATTGTTTCTCAACGTTACTATAAAATTACAAAATATGGCCAGTTTAA
CCAGTAACAACAGCACGACGAGTCCACGGCGTCAACGTTATAATCGTGCGTCCACCACCA
GTGTGACTCAGCTGTTGTCGGACGGCTACTCCAGTTTCATTAACCGTTTAACGAGACGAG
GTCCCTCTGAAAAATCCGACACCGCAGTTGATTCTAAACTGACGATACCGCGATCTCGTT
TTAATGATAACTTTTCCAATAACACTTCATCACTTTCTAATTTCCGTCGTTACGATAATA
ATAATGGCCACATATTACCATATTCATCGTTGACTTCAATGGCGACTACACCTAGTTCTA
GGAAATTGAATGACGACCGTGCCTACTCCACTTACTTGGGAACAACAAAATCTAGAATTG
ACACTTCACCATTGCGTTCTACGTCCGGTATTACCACTGTCAGTCGTAGTGACTCATTCC
GCAGAGCCCAAATGAAAGATAAATCATCCCCGTATACAAAAAGGTATCCTCTAAAAGAAA
ACAACAACAACATTGAACAAACATTATCATTGGGTAGTACTCGCAGTCGTTTAGAAGATA
AATATTCTTCTGTTTTGGACCGAATAGCAAGTCAAAAGAAGGAAAGAGCTAGAAAAGATA
AAGAACATGAAAAAACATTAGAACCAGAACCTGCTCTCCCGAGAGGTTTAATGAGAAGTT
TGACGACGGCCGTTTTTGGAGAACATACTTTTAAAAGGAATAATTATTCTCGCGAAAAGA
CTAGGGACAAAACTCCTTACAGAAATGCGACTGATCGACGATTATCCAGTCATAAACAAA
AAGATAAAGATGAATATAAGAATGGCTTCGAAGTACTGCAAAAGGATCACCATTTCGGTA
AGGACCGTGATAGTGTATACAGAAGACATCAACGACGTTCATTGAGGGCTGAGAAAAGCG
AAAATAGCGAAAGAAAAACCACAAAGATGACTTTGAGACCAATAGACATAGACCTCCAAA
CTAGCAATCGAGATCTTATTTCTCCGTTAGCCATAAAAGAAGCTATCTCTAAGTCTAAAA
TTACAAAAACGCCGGCTTCGTCTCCGACGCGAGATTCGGGTAGACAGAAACAAATATATT
TTCCGTCCAGTGACGAAGATGACGATAAAACCCCTGTTGGAGATCTGGTACTGACCGATC
GTGAAACGAGACGCAAAGAAATTCAGGGATTGATAATGAAGTATGCGCATTTAGACGAAA
TGTACGATCGCATTGGAGATAAAAATGAAGTGACGAACGACACGAGTGCCATACGAAAAC
CGGAGCCCTTAGCTGTTGGAGACGTAGTAGCATTGCCGCCGGAGCTGCGCAGTCGGCATC
GTCCCCAGAGACCTCGCCACCAGACGCGGCGCGCGGCAACGCCGCCTAGCTCCCGGGCAC
GCTCCTCCGTCAAGGACGACAAGGACGGACATCTGGTCTACTGGCCCGGCTATGTCATGG
GAGCGAGATACAAAATCATCGACACGCTCGGCGAGGGCACCTTCGGCAAAGTCGTCGAGG
TGAAGGATTTAGAGCTGGAGCACAGAATGGCTCTGAAGATAATCAAAAACGTCGAGAAGT
ACAGAGAGGCTGCCAAACTTGAGATTAACGTATTAGAGAAATTAGCTGACGTCGATCCGG
ATTGTAAGAATTTGTGCGTGAAGATGTTGGACTGGTTTGAGTACCACGGTCACATGTGCA
TCGCGTTTGAAATGCTCGGTCAAAGTGTATTTGACTTCCTGAAAGACAACAACTACCAGC
CGTACCCGCTGGAGCAGGTGCGCCACATCTCGTACCAGCTCGTGTACAGCGTGATGTTCC
TGCACGACAACAAACTGACGCACACCGATCTCAAACCTGAAAATATATTATTCGTTGACA
GCGATTACGAGGTCGTCAGCGTCTACACTAGTTCTAAGAAGACACATGACTTAAGACGCG
TGAAGCGAAGCGATGTTAGACTGATAGACTTCGGCAGCGCCACCTTCGACCACGAGCACC
ACAGCACCATCGTCTCCACCAGACACTACCGGGCGCCAGAAGTCATCCTGGAGCTGGGCT
GGTCGCAGCCGTGCGACGTGTGGTCGATAGGCTGCATCATGTTCGAGCTGTACCTCGGGA
TCACGCTCTTCCAGACACACGACAACAGGGAGCACCTCGCTATGATGGAGAGGATCCTGG
GACCCATACCGTACAGAATGGCGCGGAAAACTAGAACAAAATATTTCTATCATGGAAAGT
TAGATTGGGAAGAAAAATCGTCTGCTGGCAGATACGTCAGAGAAAATTGTAAACCATTAT
TGAGGTACTTACTGAACAACAACGAGGAGGCGCGTCAGCTGTTCGACCTGATCGCGCGCA
TGCTGGAGTACGAGCCCTCGCAGCGCGTGACCCTGCGCGACGCGCTCAAGCACCCCTTCT
TCAACAAGCTGCCGCCGCACCAGAGGCTCGGCAATGAACGCGCGCGGTCGCACTCGTTGA
GTCGGTGAGGGGGGCCGACGACGTCTTGTGAATACTTTGTACATATAATAATGAACTATA
AGTGATAAATATTTTGTCGTACGCTCTAATTATAGGAATATTTTGTTGTGAATCGGTACT
TCTCAATTTGTATTTATAAATAATTATTTCAAAATAAAGACTTGTCAGTCTTGACATTAT
TTGTTTTTTTTTTTGTTGCGTCGCAA
(4826 bp)

- SilkBase 1999-2023 -