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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12615_c1_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_RB1-inducible_coiled-coil_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:6.92 TPM:6.96
ORF EntryO_BomoSK11447_3prime_partial:A_BomoSK_comp12615_c1_seq1
Sequence
(Nucleotide)
CATGTCAGCTGAGTTATCGAGTTATGAAATGGTGGTGTTTTGCAATACATACAAAGAAAA
TGAAATAAGTTGATTTAGAATATTGTTTTTCTCCAATAATTTGTTGATTAAAATTATGAA
CCATTTTTAATCACTACAAAATGTAAAATTGAATAGCAATGATAAATCAATCGAGTCATT
ACGGTAGACTACAGTTGAAGGGTATAAAATATACAGGCTTATAAAATTTTGAAGTGGTTT
TACTAAACAGTCAAAATGTTGTATGTTTTTCATGTTGATGCTGGTCAAATGACCACATAT
GACATGAGCTTAACCCTGCAAACTGTTGCCAATTTGAAAATAGCAATAGAAAGGAAAACA
AAGGTACCTGCAAATGCTTTAGTGCTGCTTGTTAGTGGAGGTGAAGTATTAGAATCGGAC
CACATGGTTTCCTCATACAGTGCTGGTACAGACACAAATCCTATTTATATGTTCAACAAA
CCATCAGTTAAAGAAAGCCACTTGCAGCAATCAATGTGCGATTTAAGTCCCATAGTAGAG
CTGAGCTCTGGTGAATTCACTAGTGATACTCGTAATACTTTGGACGGGAAATCAGTTGCT
GAACTGAAGAATGAAGTGGAAGTTTGTTGTTCCATGGCACCGACAGTTCACACAGTGATA
ACATGTGCCTCACTGGCACAACAATTCAGTGATCTCGCATATAAAGTTTATAGGAGTTGT
GATCAACTTGTACATGAGCAGCATTTACAACATCAGGGATGGGCAGCCGTTGTCGCAAAT
TTAGAAGACATCTACAATGAATTTTGTGAACGGTCTAGGAGTTTCAAAGAATCTTTCAAA
AAACACAGACTAAAAAAGGACGAGTACCATGAAAACCTTGAAACGTTAAACGAAGTTTTA
GATTATCTAGCTAAAATACCGATATTGCCAGCTTTGCAACTGAACGCGGAAGCACATCGG
TTCTCTGCCTTCGATGTTTTTGAGGAGACGGATTTCGAAGGTCACTCGTATAGAAGCGGT
CACGCATTGGATCATAGTTCAGAGAGTAAAGCCGTTCAGGATTTTGGTGTTGATGCTTTT
AAATTGTCCGAGGAAGATGTATTCGATCAAGATGTCTCATCGGGCAGTAAAGATGTGCAA
TCTCAAGTTGGTAAAAAAATTGAGAGCTCAGACGAAGGGATCATGTTCAGGACGAGGGCG
TCTGAAAGCAGGGAGGAGCCAACGTTATTACATTGGATCCTTGCTCAAGGGAACAAAGCC
TCTTTGAGGGATATTCTTGATTACTGCAAGAAGGGTCTTGCTTTGATCGTTGCAGAACCT
CTGAAGGAAAAGGAAGCCGAACTATGTCACATATTGGAATACGCTAATATGCGAGGTTTG
AAACAGATCAAAGGCATCGAGGACCGACTGTACGGGCTCGATCAGTTGTTAAGTGAAGTC
AAGAAATTGGAAAGAGACCAACACAATCAAGCTGCTTCGCTTATACAATATCGTGAACGT
TTGAACTCGGCTTGCGACCCGTCAGTGTTGCCGACGTTAGTGCAATCGCACTGGTGTCAG
CTCAAGAAGTTGCTCAAGGGACACCAGACTTTAGTGGACATAAGACGCCGCATCTCTAAG
TCGAAAGATGAACTGTCTCATATTTTGAGAGCAAGATTAGAGGCGGTGCTGATGATCGAG
AACTCGATGTCGGTGCAGGACGCGCACGCGATGCTGTCGTACCAGTGCTTCAACCGTCTG
GCGCGCTACTTCAGCATCGTGGCTCAGTTGCACCGCGCGCCCGCCGTGTTCGTGCGGGCC
GTGCACGAGTGCGCCCGCAGGAGGACCTTCTCTACGCACCATCTTAAATGGGCCACAGAA
TTAGCGGAAAAATTGCTTAAAATCCACGACGAGGAAGTGCGTCGCCGTCAGGAGTTCAAC
GAACTCTTCGAGGGTCATTTCTTGAGGAGCCTCTTCCCCGGACTCACGGACCTACCGCCC
GCCTTCTCCACGCAGGCCCCGCCGGTCTTCGATGATCGGTTACCGAAGATCACGGATACT
GACGTCGAATTTATTTTGAATTCGTTCCCGGATTTGGCGAAGGATGTCCCGCAATATGAC
ATGGAAGCAACCGTTAAATTCTTTCAACAAAGGTTAAGTGCAATAAACCAAGAAGACAAT
AATGTAGAAGTACAAGTCGATTTTGATAAGGACACAGACGGTGACAATGATACTGGCGAT
TTCGAAAGAGTGTCGCAGCAGATCGATACTAAGAAGATCGATATTTCGACGACGTGCTCT
CCGGACACGGTAGCGGTGTCGACCGTCACTGAGGAGAACATGGATACACA
(2330 bp)

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