SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12600_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_F_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0030855 P epithelial cell differentiation
GO:0044822 F RNA binding
Transcript
Level		FPKM:16.09 TPM:16.19
ORF EntryO_BomoSK11411_complete:A_BomoSK_comp12600_c0_seq1
Sequence
(Nucleotide)
GGGGGCGGGGGGTCGCGGCCCGGCGGGACCCACTGCGTGCACATGCGGGGCCTGCCCTTC
AGGGCCACGGCGCAAGATATAGCTTACTTCTTCAAGCCGATCCGTCCCGTGAACATCAAC
ATCCTATTCGACAATTCGGGTCGGCCCTCTGGAGAGGCTGACGTCGACTTCGAGTGCCAC
GAAGACGCCATGAGGGCGATGAGGCGGGACAAGAACAACATGGACCACCGCTACATCGAG
CTGTTCATGAACTCCGCGCCGGGGGCGGGCGGCTTCAAGGGCAACCGGAACTTCAACAGG
AACTACTGAACCGCTCGTCCGCCGCGACGTCCAACTGTTCTAGATTATGTTCTCCCATTC
TTTAATTAATTATATTACTTAGTTATTACATGCTGAGAGCGCACAGTAAATGTCGTCACT
TGTAAACTGGAGGCTGGAAACGTGCTCACGAGTACTCACAGTCGGCAGCCCATTAGCGAT
GCGCTCGCAGACCTCCGGAAAGGTTCGCGAACAGAACGTGTAATAATGCGACGAGGACAT
TTTGTTGAAGAACACGGACACTTTCATTTCGTAGTTTGTTTTGTTCGTAAACTGAAACTT
GATGTACATTTGTTTGGACGATTCGATATTTTGGAAATAAAATTACTTTATTTTCGCTTT
GATGTTTTAGGAATAACTCGTGTCCTTATAGATCTGTATGTAGGTCAACATTGCGGTGCA
GAGGGAACTAACTGTACAGCGCGGTGCCTTACCGTCAAAAGGGATGGTATTTCATTTAAA
AAAGTTAACACTAATATTATTTGTATTTTTACAAAAATATATATATATATATAGGTAGAG
GTCCTAGAAATGAATTTGTCTTTTTCAAGTTGAAAGCATTGAGTATTTACATTAGAACAA
TAGAGTGTACTTAAAATTGTAATACTTTCATGTAATCTATAACTCTCTTTAAGAAACAAG
ACTAATATCTAGATAATGAAATTATATGTAAAAATAGAATGGTATATAATATCTTTCTCG
CTGTTCTGGTTGTCAGCAGCCCAGTAGGAGAACTCGATCAGTAAATAGTAGCTTCATTTA
AAGACGCGGCTGGCCACACAAGCACAGGAACAAATCGTTAATGTAGTCTTGTCATATACA
TTTAGAGTTTTCAAAAATATAAAAGACACTCCTGTGTGTTAAACAGACCAACTTATAGTG
TTATTATTTGACAAAGTCCTCGCGTACCCTCCGCACACACGTACACGCACACCTACAATA
AGTGATACAGCTCACGTCGGCGTGCAACCTACACAATATAAATAAAACCGATTTTTTGTT
TTATTTTTAAAATTATCTATTTGAGGGTATTTTAGTAGCTCGAGCAGTAGCTGCGTCCGC
GGAGGGAGGGGACATCTCGCTGCAGCCGAATCTATATTTTTTAACAAAAACTTATGCCGA
GCATTTTTCGCACTGTCTCGTTCGGTTTATTTGAAATTATATTAAAACTTGCTGCCGATG
CTGGGACTCCTGTAAACTGTACAAATGCAAATAGAAGTATCTACCTCTTCAGAAATATTT
TTTGTATTGGTTAAAAAAATTAAAGTTTTATTACCAAATAAATGGTATATTT
(1612 bp)

- SilkBase 1999-2023 -