SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12593_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106141703_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.24 TPM:2.26
ORF EntryO_BomoSK11389_complete:A_BomoSK_comp12593_c0_seq1
Sequence
(Nucleotide)
ACTGAAACGCATTACTGCTTCACGCACAAAATAGGCACTCACCCTAGCGGGTTCACTAGT
AGTAGTAATAATAATAATAATAATAAGCCCTTTATTTCTTGCTTTACAAAGTTTAAAAAA
AATATATAATAAATATAAATGTATGTATAAGTATTTAGGATGTAAAAGAGTTTTGTAATA
AATCAGTTAAATTTAGTTAGCAAGAACCCCGGATCGGGTAAAGGCCTCCTCCAAAGATGC
CCAAGCGTCTCTATCCTGTGCTACGTCTATCCAGTTTGGGCCAGCTGTTCGTCTAAGATC
GTCTTCCCATCTGGTTAGTGGTCTCCCTCGACTTCTCTTGCCCGTTGGGCCGTTCCAAGA
TGTAACTTTCGCAGTCCATCTCTGGTCTGTATATCTCGCGACATGGCCAGCCCATTTCCA
TTTTAGTTTTAGTGCATAAGTCAGGGCGTCGGTCGCGTTAGTGGTTCTTCTTATCTTAGT
ATGCCTTACCTTATCCATCTTCCTTATTTTGAGCATACTCCTCTCCATCCCCCTTTGACA
GGTCCTGATTTTATTTGTGGCTTTAGAGGAGAACTTCCACGTCTGGCACCCATACGTCAG
GCATGGTAAGAGACTTGAGTTCATAACTTTTGTTTTGATGTCTGTGGGCATATTACTTTT
GAAAATTTCCTTTAGGTTCCAAAATTTATTCCATGTCGATTGAACCCTTCTTTCCATTTC
TAGTATGTCGCTGTTTTTGGCAAAACTTAGCAGTTTTCCCAAGTATATGTATTTCTCTAC
ATATTCTAGTGGCTTTCCATTGATTTTTATAGGATTTTTCCATCTGTTGTTGGTCATTAT
TTTGGTTTTAGTAAGGTTCATCTCGAGCCCCACCTTGATACTGGCTTGGTGAAGAGTCTC
TATCATGTATTGCATCTGGCCGGCCGTCTCTGACAGAAGTGCTAGGTCGTCTGCGAACCT
AAGATGACTTAAATATTCTCCTTTTATACAAAGTCCTATTTTGTGAAAGTCCAGCTTGCC
AATGATGTTTTCCAGGATTGATATAAATAGTATTGGGGAAAGGGGGTCCCCCTGTCTTAC
TCCTCTTTGAATGGGAAACCGTGGGCCAATGGATTCGAGTTTGATCCTTCCTTTATTGTT
ATTGTATATATTTTGGATAGTCTTTATATATACTTCTTCAACTCCTTGCTCTGCCAAACT
TTCCCATATGCTGTTGTGCGAAACGGTGTCGAAAGCTTTTTGGTAGTCAATAAAAGTTAT
ATATAGAGTTCTCTGGTGTTCTTGATATTTTTCTATTATTAACTCTATTGTATGGATGTG
GTCAATTGTTGAAAAGGATGATATACTGGAGTGAAAACTTGTTGGATTTCTAAGCAGTAT
GTAAGTTTTTGCATTACTGCCGATATAAACTGTACTCCATTATCACAAACTATTTTTCGT
GGTAGTCAATCTCGGAGAAATATTTCATTTAGCAAAATCAAAGCGCAGCTTTCACCTGTA
GCTTCTCTCAACGGAAACATTTCAACCCATCGTGAAGCCATGTCTTCTATTATAAATATC
CATTTTTCACCAGAAAGGCCTTTTGGTAACGGACCAAACAAGTCTACTGATAATACTTCA
AACCTCTGGGTATTTGGAGTAGATTGATATAAACCTGCTGGTTTCTGATTTGAAGGTTTA
TATTTCTGACATTCTTCACATGTTTTCACGTATTTTATGACATCTTTTCGTTGCCCTTTC
CAATAATTTTTTTTTATGATTCGCTGAAGAGTTCTTTCTGCTCCCATATGTCCAGCAGTG
TGTGAATCGTGAAACGCTTTAAGGACGTTAGTTATTTCGTGACAAGGGACTATTAACTTT
GCATTTTCGTCGTCTTGTTCTGGAGTGTAAAGATACAAAACACCTTTATGTAGTATATAT
CCTTTTTTAACATATTCAGCATAGTTTATGGAATGTCCTCCTTCTTCTAAAGTTTCAATT
ATATTTTTTAGAACTTCATCTTTTAATTGTTCGTCTCTTAAATGTTTTTCATTAAGTTTC
GGCATCTCGAGATCTATACGACAAATGGTACAATCGTCATCATGATCCTGACATGGTGGT
CGAGATAGTGTGTCGGCCACGACATTAGTTCGTCCTGGAGAATACTTAATTTGGAAATCA
TAGGGTTGTAACTGGAGTGCCCAACGTGCTAGAGTTGGACCCGTTGGAGTTTTTAGGTTC
ATTAACCACTTCAGCGGTTGGTGATCTGTTATAGTTACAAATTTTGTTCCTTCTATGTAT
CCTCGGAACTTTGAAATAGCCCAAACTATGGCTAATGCTTCTTTCTCAGTTACAGTATAA
TTGCATTCAGCTGTATTCAGGAGTCTACTTGCGTATTCTACTGGGTGTTCTTCTTCTCCC
TCCCCCTGCACTAAAGCTGCTCCTATAGCATACTGGCTTGCATCTGTTTTAATTGTGAAA
GGTAAATTAGTGTTAGCTTGTCTTAAGACTGGGGCAGTCGTCAAAGCGAGCTTTAATTTG
TCGAAAGCTTCTTGTTGTTTTGACTCCCATTTCCAACTTACTTTCTTCTTTGTTAGATTG
GTTAAAGGTTGTGCAATTTGTGCAAAATTTCTTATGAATCTTCGATACCATGACGCAGTT
TGGAGAAACGACATTAATTGTTTCATTGTTTTGGGTTTGTTGAGTTTCATAATTGCTGAT
ACCTTTTCTGGGTCAGACTTTATTCCCTCAGGTACAATAATATGTCCTAGGTATTTTATT
TCTGTGCATCCGAATTTACATTTGTTTCTGTTAGCTCTGAGTTTGTACTCACGTAGCTTA
TTAAATATTTCTTGCAGATTCTCTACATGCTCTTTAAAGGAGTTTGCTCTTGTTATACAA
TCATCTAAGTATGCTAGTGTGTACTTTGTCTTTAAGCCTTGTATAAATTTATCCATTAGC
CTTTGAAAAGTTGCTGGAGCATTTCGTAATCCAAATGGCATTCTTTTAAAACGAAAATTT
CCAAACGGTGATATAAAGCTTGTTTTGTCTTGATCGTCTGGATTTACCACTATTTGATAG
TATCCTGATTGTAAGTCGAGTGTAG
(3085 bp)

- SilkBase 1999-2023 -