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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12538_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_protein_SON_isoform_X1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:5.90 TPM:5.94
ORF EntryO_BomoSK11127_complete:A_BomoSK_comp12538_c0_seq2
Sequence
(Nucleotide)
GAGAATATTTACAGTACAATTATCAACACAAAACAAGTAATCTTTGACAAAAATGACTAG
TTTGATTAACAAAATCGAGTTGCTAATTAAAAGGGAAAAAACTACACCGGAAAAAAAGAA
AGATGACTCAAAAAAATCTTCGCATGAAATCCTCTCTGAGCTATTCAGCGCCTTCAATGC
TGACCCTCCTAAAATCGAGGAGGTGCCTTCAAAGAAAAAGAAAACCAAAAAGAAACACAA
GAAAAAAGACAAGAAACGATCCCACAGGAATACCAAAAGCGATGACTCTGATAATAGTGA
AATTTCATCAAACAAAGCTAAAAAACGGAAAAAGAGTAAATTGAAAAAACGTAGATACAG
TCGATCGCCTTCACTTCGTTCTCTGACTCCGCCAAAAAAAATTAAATGTGAATCGGACGG
GCTAAAATCGAAGAAAACAGATAAAACTACAAAGAAAAAATATGCAAATGAAAATATTAA
AATTGAATCTGTAGAAAATGAGAAACCATTACCCATAAAATCTGAAGTCCCAAGTGATAC
GAATATACTGAATTCAATGGATGCAAGCAGAATCCCTATGCCCGAATCTCCTCATGGCTC
TAAACTTGTCAGCACTGATCTCACATTAAATCAGAACCAAAATCAAGAGCCGACCAACAA
ACAGGATTCGAATACTGAATCAGACAAAAATAAAGGTAAAATTCAAATAAAAAACCTGAA
ATTTAGTGCTGTGTTTGAAGAAACTGTTAAAAAAGCTGAAGAACAAGCCAGGAAAAAAGC
TGAAAAATATGAGGATGGTGAATATACTGACTCCTCAAGTAGTTCAGTCAAAGAAGTGGA
GCTGAATCCCCAATTTCCGAAAACATCAGATCCTGGTGGTATTTTAAAACAGCAAATTGT
GGAAGATAATAAAATCTGTGAAGAAGAAAAGAAAAGTCAGAAAAAAGAAAAATCTGAAAT
TTCACATAAAAAATCACATAAAGACAAAAGTCGTTCTAAAAGATCTCCTAGTAAATCTAG
ACGATCCAGATCACGGTCTACTTCACGCAGACATAGACATCGTTCTACTAGCCGTTCGCG
GCATAGATCCAGGTCAAAACGAAGATCGCGGTCTCGACACAGGTCTAGACATTATTCTCC
GAGACAACGAAGTAGACGATCTGGAGCAAGTCGATCACCAACTGGGGTAAAATTAGCAGA
CAGTGAAAAAAAACGACTTCTTGAAGTAGCAAGGCGAAATGCTATCAATATGCTCAAAAA
TGGTGCGGTGCCTGCTGGGGCGGCTGCACTCCCTCCACATACCAGAAACCAAGTTATGGC
TGCTATACAATCTGGAGGTAAATCAGTGGATGAACTAACAGATTTCTGCAAACACTTATC
AAAAAAGGAAGCACTAGGGGAGCTATCTTCTGTCTCATCAAACGATGATGACATGAGTGA
GAATGAAGACACACTTGCTTTCCATCATCCATTTCTTGTTAAAGAAAAGGCTCCTATTGT
CATGAATATTAGGGGAGGAGCGCCCCTTCCAATAAAAAACAGCATTGTTCCAGTAGCCAA
TAAAGAGGAACTAAGATTACAGTTCCCTGTATCTTCAGGAACTCAGCACAGAGAAAAAGC
ATTAGAATGGGTTCCAGTTTCACCTCCAAAAAAAGATATGCAAATAGCCAAACTTAGTCC
CATTTCTGAAAACACGTTAACCAAAGCGATACTACCAAGTACAGTGCCCACTGAGGATGT
TGCGAAGACGAGCTCTGTACCTCTGGCACTCCCAGCCCCTCCCCAACCGTTAATTCAACC
AAGTTACATGAAGGGTTTCACATCAGGAACGCAATTATCATCGGTTCCCGCTTTAGCAGC
CCCGGGACCACAAGCTTATCCGCCAGGAATAGAGCCCGCTCCCATCGACATGGCATTGAT
TGTATCACAGAAATTGTCAATGATTCGTAAGGAACAAGAAGAAAGCGAATTGTTGAGTAC
TCATGGCTTTGGTTGGTCAAAGGACAGTGCGCTCGGTCAGTTCACTGGATCGACAGGAGC
ACAGATCTTAACCCCAAAGGAACTGGCCAGCGGTACGCAGGCTTGGGCTAAAAAGGATCA
ACTACAACGTGCAGCTCCTGTTGAGGGAGGAATGGGTATGCATCTGCTGCAGAAGATGGG
TTGGACCCCGGGTCGAGGTCTCGGGAAGGAAGGCACCGGGACCCTACAGCCGCTGCTGCT
CGAGGTCAAGCTCGACACGAAGGGTCTGCAAGCCAAAGAAGAATACAACAATAAATACAG
TAAAGCTATCAAACAACACAGAATCAGGAGTCGGGGTCCAGCGCCACTAATTGGGGCAGG
CGGTAAACATCCCGTCTCGCTGCTGGGAGAGTATTGTTCGAAACAGAAACTCGGACCGCC
AGAATATAATTTGTGTTTCGAATGTGGTCCTGATCATAAAAAAAACTTTTTGTTTAAGGT
GAGAGTGGCCGGAGTCGAATACCAGCCAGCCGTCGCGAGCGCCAATAAAAAACAAGCCAA
AGCAGACGCCGCACAGTTGGCGTTGCAGAAATTAGGAATAGTCTGCTAGTGCTCACACAT
AAAACAATATGGATACGATTTTGTACTTTGCTGTAAATATATACAATTTTATGTAGTTAT
TGTTATTTTATTGAATAATAGCCAAATCCGGCCCGCTCAGCTGTCCGATCTCGATTTGGC
(2700 bp)

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