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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12520_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SIAH1-like_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030163 P protein catabolic process
GO:0030877 C beta-catenin destruction complex
GO:0031648 P protein destabilization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042802 F identical protein binding
GO:0043065 P positive regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051402 P neuron apoptotic process
GO:0061630 F ubiquitin protein ligase activity
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:11.65 TPM:11.72
ORF EntryO_BomoSK11075_complete:A_BomoSK_comp12520_c0_seq1
Sequence
(Nucleotide)
GCGAGTTTTGTTCGATTGGTCGTCATTGAGTTTTACGACGATTATCGTCCTTTTGTAATG
AGCTAGAACGTTCGCATAGCTATTAACTTTTACCTTTTTTATTTAGTCTTTCTATACAGT
ACACGTAATTATGCAGTAAAATAAAAATTGCCGAACTCTTCGCAAACACAAGTTGTTATC
ATTCGCCTAGATTCTCATGGAGATTAGCCCACATATATCACGACGTACATAACAGTAAGA
GCCATCCGCCTCGGTAACTGTAATGGAAATCTACTTCAACTCGACCAGCAGACGGAAGAA
ATCCACCGTGGAAGGCTATAAGTGAAGTGAGCGGTGCGTGTTTAGGAAGTAATCGTGGAG
GACTGGGAGATCGTCGACGGACGTGATCTATGTGCGCGTAACGGTGACATGAGCACGAAC
ATCAAGCGGCGTGGAGCTAGTGGGTCCAGTTGTTCAGTGCCCGGAGTGCCGGCCCTCGTG
AACGCGCCCACCGCCATGTCTGCCGACCTCGCCTCGCTGTTTGAGTGTCCCGTTTGCTTC
GACTATGTGCTGCCCCCCATCCTACAGTGTCAGAGTGGGCACCTGGTGTGCTCTAGCTGC
CGTCCCAAGCTGTCCTGCTGCCCGACGTGTCGCGGGCCCCTCGGAAATATTCGCAACCTT
GCAATGGAAAAGGTTGCCAGTAATGTTATGTTCCCCTGTAAACATTCTAACACGGGCTGT
ACTGTGACTCTTGTGCACACGGAGAAAGCTGAACATGAAGAAGCTTGTGAATTCAGGCCG
TACTCTTGTCCTTGTCCCGGGGCATCCTGCAAGTGGCAAGGTGGTCTTGATCAAGTAATG
CCGCATCTAATGATGTCTCACAAAAGTATCACAACACTCCAAGGAGAAGATATAGTGTTC
TTAGCTACGGACATCAATCTGCCCGGTGCGGTGGACTGGGTGATGATGCAGTCATGCTTC
AATCATCATTTTATGTTAGTTTTAGAAAAACAAGAAAAATTTGATGGTCACCAGCAGTTC
TTTGCAATTGTGCAACTTATAGGATCTCGTAAAGAAGCTGAAAACTTTGCATACCGATTG
GAGTTGAACGGTCACAGGCGTCGGCTAACGTGGGAGGCAATGCCTAGATCCATTCACGAA
GGAGTGTCATCGGCCATCATGAACTCAGACTGCCTGGTGTTTGATACATCACTTGCACAA
TTATTTGCAGATAATGGCAACCTTGGTATAAATGTCACAATATCTATTGCCTAACCAATG
TTTCTTTTTACAATTTATGTGAGCTAAAACTCTTGTATTAGACTCATAATTACGCAGTGT
GTTACACGAAACATGACATAAAAGTTGGAACAAATTTGCAAATTTTAAAATGTAATTTTA
TTTAGTTTTCTTTTTTTTTTTCTAAATGTAAATAATCTTTGTCCATAGATAAATGTAATC
GTTAATTTTCTAAATCATATTATTTTATGATTTACTTACCATCTCACGTATATATGACTT
GTACTATAATTTAAATATAATTGTTCAAATGAAAGTAAGCCAAAAAAATGTTTTTTTTTT
CTTTTCAACTTTTGTAAATGTGTGTTCAATATAGTTGTAAGTAGCAGAAGTGATTATTTC
TTGCTAATTCAATAATTGCCTTGTGAACATAGTTTATAACAAATTATGACGAATGATGAT
CGCAAGAAGGGATTACTTAAATTCTGTAAAATGAACAAATTTGTATTTTAAATGCATGAA
AAAATTTTTAGTGAATAAAATTTATAATAGAAATGTGATGTTGCTTTACAAGTCTACCCA
ATTATGCAGAAACTCGATTAACAAGAATTTACAAAACCAACAAAAAAGTTCTTAAGCGAA
GAATTTTAGACACTGGTTTGACATTTAAAAGTAATTCAGTGTTACCTTTCAATTATAAAT
GATTACGAAAAAGGTACGAATCGCGCAGATAAGTTATGACAAAAAATCGTTTTTTTTTTT
TCAATTAAAAAAATGTACATACTCAATACTTTTTTCTAAATAAATGCTGTGTAGTCTGAT
ATTAATTTGTATTTTATGTAGATTATATCAAAAATACGATTTGACCTCTGATTCATTTTC
ATTTTAGCTGGATGCTGGTCGGATCTTTTCTGCATAACAGGGTCGAATGGTAAACAGTGC
TCGAACCAACTATCACGGTCAACGCGTGACCGAAACAAACGTACCTATTATTTAAACAAA
TAAAAAATACGTTGAACAAAATTGAATGCCTTAGGACTGGTTATAGTTTGAACTGGATCT
TGCCCACGGTACTTATGATTACAATAATATTCTTAGATAGAAAAGATTAAAGACGTAGGT
TGAAAGTAGATCATAACTTTTCGAAGATACGGCTTAGTTTAGCCTGAGTGTATGCTGGCG
CGTATAACAAAACCTTTGGATATGTAAATATGAATCCGAAAAAGTTATTTTTTCATAACA
CTCATTATTCATTATTAGATTCATAATGATAAACATAAATTTCATTAGTTAAAAGAAGAC
CATGTTAATTTTAAACAATTAATTGGAGAAATATACTCTGACATTCAATAGCAATAATTA
TGTAACGAACGGTCACCAAATCAACGTATTGTTTTTTGAGTTGGCAGCATGTACTTTGTT
ATGTTTAATGGCTTTGATTACCACTTAACGTCAGACTGCCCGCGAGCTTCTTTCCTCATC
CGCGACAATAACAACATTACACGCTCGACTGCGGTAAGCCGTGTTTTGTTTTCATTGTCC
ATAACATAAATACAAATAGCATATAATAAAGAGTTTTAATAAGTCACTTTCAACTAGATT
CGGAATATATGTTTAATAATTAAAAAATTAATTTAAAACAGGTTTTACTTTGCTTCGAGC
AATAATAGTTCTCTGGTGGTCACTCGGCGGGTAATCAAATTGCCCACCGACAAAACCCCA
AATTCAGACCCCAAATTTTCATATTATTGAAATCATTGCCCAGACCGGGATTCTAACCTG
GATCTCGTCGTCTCAATAATCACTCACTATTACATTTAACCTTAATATATTAAATCTATC
TAGCGACAAAACAATAAATTTCGCTTTAGTCAAATATTTTACACAAAAGGTTCAGCGAAA
TACATGCTCAAATTTTTTAAGATTGATTTTTTAAAACGTGGGCGTTAAGTACAATATTGT
AAATGCATTGCCTACAAATTGTTGCTCATTTCTGTAATAACTTACTTTTTTAATCATGCA
GAAATGTCACCGGTCACGTTACTTCTAATTTAAAGTTTGAATTGTCGCCATTTTGGAAAA
CTAAAAAGGTTGTTTTATTTTTCCACAACACGCGCGCAATGGTGAAAAATGACTGTTATC
TTGTATCTCATAAGATAAATCTCGTCAAGTAAAATAAAAATTATAATTGAAATAAATTTT
TGTAATGTAATCAAAA
(3436 bp)

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