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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12518_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_rab_proteins_geranylgeranyltransferase_component_A_1_[Amyelois_transitella]
Ontology
GO:0000922 C spindle pole
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005818 C aster
GO:0005856 C cytoskeleton
GO:0005968 C Rab-protein geranylgeranyltransferase complex
GO:0006886 P intracellular protein transport
GO:0007049 P cell cycle
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016491 F oxidoreductase activity
GO:0017137 F small GTPase binding
GO:0018344 P protein geranylgeranylation
GO:0019233 P sensory perception of pain
GO:0043547 P positive regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:22.09 TPM:22.22
ORF EntryO_BomoSK11073_complete:A_BomoSK_comp12518_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTCTAATAATAATCACAATTTATTACATAAATGCATAAGCTGCAAAGGCATG
TTTATTCTCATTTGATAATAAATATTCGTAGACGTGCTAAATATAACTTAAATAAACAAA
AATTAATATGTGCTAGGTACTATCTATAATAATTATGACTGGTGCGTCCGATACTTTAGA
AACACTAGAACTGCGTTCCGGCTAACTAACGAAGACACATTGCACATACATATCACTAAT
TTCAAATAATACTTTCGATTCATACGAACAGCGACAGAGTTAACCAAAACAAGAATCATT
CCGAGAGAGCATCCACAATTGTCGCCGTTAAAAATAAATTTATACCTAAAGACAATTTCT
CCGGTCATTGAATACATATATCGTGTCGGAGGATTTAAAAGGGATTTCGACAAAAAATAA
AATACATAATTTAACATTGCTAAAGTCGATCTTGCTGACTCGCTCAAGACAACCAAGCCG
TTAATCGCTAACGGGTGCAGATCATAACACACTGATATGTTCGAAAATTGTTACGATTTC
AATTCTAAGAAATCGCATTCAGAATGAGAAATTATCAAACCGATTATTTGACGGACTTCG
CTTATGAGCAACGTGATCCAACATGAGCCCCCCGACGAAGGAACATGATCTGCGACCCGA
TATCGACATCCCCACAAACTCGCACCAGTCGGAATGCACGAAGTCAAGCGACCAAAGCGT
ATATATCTTACCGAGATTATTATCATACTAGATTCGAGAACGTTCGAACGCGTATTATAA
TCCTAGAAACGACGGGACAGTCTAAGCGAACATTTCTAAAACGCAATGGAATGCAAAAGG
TGATTGTGACATGAACTCACAAGCGAACGGTAATTTGATAAGTTAATGCGGACCACCCGC
ATTCGTTTCCCGAATTATTGAGGTGTTGTTTACAAATTATAGTCGCACGAGTCGAAGCGT
CTCGACTTGATTATATAACGCTAGAATTATAAAACGTGCCTACTCCTTCGGTTCGGCTTC
TTCGTCTTGTTCCCGTTGGAATTCGGGTCCGTGGGTGACGTCATCCTCGAACACTATCTC
CTCGGGGTTGGGCGCCCGCGGCAGAAACTCCTCTCCCGGACAAATCTTCTTGAAGATTTG
CTCAGCCTGTTCGACGGCTCTGTCGAAGTCCAGTCCGGCGTCGGGCCCGGAGCAGACGTG
CACGTTGTCCACCACGCTCGACACCGGCGAGCTCGTGTCCTTCACGTTGTAGAACAGCGA
CCACAGGCACTTCGGCTTATCCGTGGCCGCGGTCTGGTCGCCCCCGGACATATCGAAGAT
TCGCTCTGCGTACGGTTTGAGATCGCTCTCCGCGTCTTTAGTTTTCTTCGTTATGAAATA
AACCACGAACAATCCCTTGGGGCAGGATCCGGTAGCGGGGCCCACTTCTAGCACGGTGAC
GGCATTGTCGTCGTCAGCCAGCGGCGGGAAGCGGAGCAACGTGAGCGGTTCCTTCTCGCT
GGCCATGATGGTGCCGTTGGTGACGAACACCGCCTTGGAGATGTCGCAGCTCTCAGCCGG
TTCCGAAGACATCAGCTCCTCGGGGCACTCGTGGACGCCGATGACCAGGTGATCGCAGTT
AAGCTTCTTCGACTTGCTATCGATGGTGACGACGGTTTTTCCTTCATCAACGGTTTTCGT
TTCGACTTTATCGATGGGCCGATTCAGGCAGTAGACCCCGCCGAAAACTGCACAGAGCCT
GCAGAAGCATTGCGGCAATTCTCCGCTTCCATACATGGGCCATAAGAATGGAGTGTTGCC
ATATCTTCCGAGGCTCATGAGGAACTTCTTGCATTCCTTGACACCTTCGAGGCAGGGCAA
GCTGTTGTTCCCGCCAGCGATCGCGTACAGGATGTAGTGAATGAGGTTCGGGGTCAAGCC
CTTGTGAGTCAAGTATTCCTTCAATGTCTTGTTGTTCCAGTCTTTAAACTCATTGTTCAT
CTCCTCTTCGCTGTAACCGACAATCGATGTCAGCATTTTCATGAGCATCCTTTTCTCGAC
GATACCGACCGCTTCGGTGGCGAATACGTCGGCTCGGGAGCAAGGAACCGGCATCAGCTG
ATCGTTGAGCCAGGTCAAGACGCGGGTCACGCATCGGAACTCAGCGTAGCGCGCGATGTT
CGAAGAGATCAGAAGCTCGACAAGGGGGCCGCGAGAGAACAACAGCTTTGGAGTTGTATC
AATGTTAAATTTCCGATACTCCGCTGCAAAATCAGCTTGGCTCCATACTTTTCTTGGTTC
ACCTTTGTTTTCATCAGTTGTTTCGCCTTGTGCAGATTCCTTTTCAATAAACCATTTTTC
AGATAAGTTGTACACTTGTTTTTGTCTATCAGGATCACTGTTCACCTCTTTTATGAACTT
CTGTAGGCCCTCAAAATTATATGAAGCCCAGAGTCCTCCATAATGATCACTAGAGTCCAT
GTGGAGGACATTCTTGCCTATCCTACTGCAAGCAGCAGCCACTATGGACTCGACCATGCC
CGTTCCCACCACGATGACCTGGAAGTCAGTTGGAAAATCTTCATCCATCATTCTAGTTTA
TATTAGGCACACAGGTTTCAATTTATTAGTTTAAATTTCTCAGTTTCGTACAATGAACCT
CACAATCCCTTGAACTTGACAATCTTG
(2667 bp)

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