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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12515_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106129437_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0001741 C XY body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002039 F p53 binding
GO:0003714 F transcription corepressor activity
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005938 C cell cortex
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007257 P obsolete activation of JUN kinase activity
GO:0008134 F transcription factor binding
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010038 P response to metal ion
GO:0010832 P negative regulation of myotube differentiation
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030295 F protein kinase activator activity
GO:0030521 P androgen receptor signaling pathway
GO:0030578 P PML body organization
GO:0031072 F heat shock protein binding
GO:0031396 P regulation of protein ubiquitination
GO:0031625 F ubiquitin protein ligase binding
GO:0033129 P positive regulation of histone phosphorylation
GO:0042393 F histone binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0044297 C cell body
GO:0045860 P positive regulation of protein kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0050681 F androgen receptor binding
GO:0070603 C SWI/SNF superfamily-type complex
GO:0071356 P cellular response to tumor necrosis factor
GO:0071454 P cellular response to anoxia
GO:1901216 P positive regulation of neuron death
Transcript
Level		FPKM:6.03 TPM:6.06
ORF EntryO_BomoSK11069_complete:A_BomoSK_comp12515_c0_seq1
Sequence
(Nucleotide)
GGCTTTCGTTGATGCACCTATTTATTTGTTGATATAACTTTCCTTCCTGTTTTATGAAAA
AATGAACGTATTTCGCTAGAGTAATGAAGCAAAATATTCCAAGTTTGTAACCTACAAGGT
TTATAATCGATTACAAAAATATTAACATTCCCGATTAACATTGATGCAACATGGCAAGCG
AAGATGTGATAGAATTAGGTTCTTCAGATGATGATACTGAACCAGCGCCAAAGAAAGCAA
AAACTCGACCGAATGCCATGGTTCACATACCAAATAATCTTTGTGGAATAACTATAAAAC
CCGCAAAGCCGTCTAATAGTGCTCTCCCACTGTCGTTAGTGGGTAGGTCAATTACAGTTA
CTAAAATCCCTAAAGATGTTAATCCAGTTTCAATGAAATTAAAGAATAATGGATGTGCTA
TTCAGAAGAATAATTCAGTTTCACCAAGACCAGTTGTTAGACAGTATATCAGACAATCAC
CAAAAAGTAAGATGACAGGGTGCCGAATTCCAGTCAATTTGGTCAACATGAATAATGCAA
GAATAGGGAATGTTCCACAGCAGTATAATAAAAATCTTGTACCGAATCCAATTTTGATAC
AGAATGCGAAACCAAAGGGATTGTTACCAGCTTCCATAACTGTTAAAAAAATGAATACCA
TGAAACTAGCCACCCCACATATAACTAACCCAAATATGAAGAAGAAATTAATAAAAATAT
CACCAAAAATACCAATAGCTAATACAACAGTGGAACTTGATGATGATGATGGTGCTTCTC
CAGGCCCTGGACCTGCTCGTCAGTGGTACCTGAGACCCGAAGAGCCGACTCAATTTGAAA
ATGATATAGGGAATGATGCCTCGGAAATTGAGAAACAAAATAATGCAGAGCCTACTCCAT
CTGATATGGTCGAGATAACTATACAAGACAGTCCTGTTCAGTCTGCAAGAAAGAGGGCAT
TTGAAGTTGGAGCTGAGTTTGCTATAACTATTGATGATAGTCCTAGTAAACCACCAGCCG
ATAGCAAAACACAAGATAATGGTAGTGATATTGAAGATAATGTACAAAAAAAGGAATCAA
GTAGAAAAAAAAAATTAGAGTATCCTTTGGAAGTGAGCAAAAGGCAGTCAATAGAAATTG
AAATATTACCATTTGAAAGTGTACCAGGAAATAAAAGTAATGATGAAGATACAGGAAACA
AACACAATACTGGTACTCAACACAATGAGGTTATTGAAATAGAAGAGTCTCCAGCAAAGT
CTCATGACCTGCAAGCAAGCACACCAAAGAAAAAGATTCCATTGGTAGTAGCACTTAAAA
ATAAAACATTTGATGATCAAGAGAATGAAGTAAAAGAAAATAATGAATTTCATCCAGTAT
ATCAGGAGTTTATAGCATTATGTTTCAAATTGGAACATTCTGATGATATGGAGAAAATAG
TTGAAAAAAAGATTAAAGCCTATTACAGACAAGTAGACAAAACTTATACTGAATCAGAAG
ATTTCATAGAAATGGTAGCAAGTAAAATTATTTCAATGAAGGCAAGCCCTGAGAAAATGT
ATTTGTACATAAAAGATATTGTTGATGAACTAAATTATAAAAGAAAAATGACAAAATCAG
TTATTGTCACAGAAGATTCAACTAAAAGTAGAGATGAAGAAAACTTTTTATATGGTGAAA
ATAGTGAATTTGATTCAAAACGACAGAGACAGATACGTAAACTTGAAAAAACCCTCAAGA
AGTTGCACCGAGCCATACAAAAACTTGAAGAACAGGAGGTTGATTTTGATGATGATGAAG
ATTCTGTTTATTTGTTAACTGAAAGGTACAAGGAAAGAATGGTTCGAGTTCATGCAAAGT
TTTGTCAGCTGACCAACACAAAGATGCCTTCAGAGCCTCGCTTACAGATCGAACCTCGAC
CTGGTCATCCTAAAGGACCAGCCAAAAAATTAGAGAAATGGATAAACAAAAAAATTCCAA
TAGGCACACCATTACCTTTCCCAGACTTCCACGATGTACTGAGGTGTGTGAGAGAAGCTA
ACGAAGAAGATGATCTCAGGTGGAATGAGGTTGATATTATGGAAGAAGCTCGAGATCTAT
TCACAAGATGTGGCAAAAAATTACAGAGACGTAGACAAGAAAATGAATGGAGGTTAGCAG
CATCAAGACTAGCTGTGGATCTCGACCCTGCCGAAAATAGCACTGACCTTAAAACTAAGT
TAGAACATAATAAAGTATTAGCGAGCAAGAAAGAGACAGATGTTTTTAACAAGTATGCCG
ATAAACAAAATCAACTTAAGCTAGAAGCAGAAGAGATAGGTGACAAGGAAGCTGAAGAGT
CACCGGACGAGAGTGACGACGAGGACACTGTTAATTTGGAGATGTCTTTGAAAACCAAAG
AAAAGAGAAAAGAAAGATTAAAGAGATTACTTCAGGGTAAATCTAAAAAGGCGAATACAA
CGAATGACACACTCAGTAAACCTGATGACACAGTGCAACTTATTGAAAATAGTGAAAATC
CTGTCACAAAACCCACTGACGAAAATGCGTCTGATGAGGTACAGGAAACTGAAACAGTTG
AAAGTGAAGATAAGGCCCAGGCTACGAAAGATCGTGACAATAATTCAGACTTCGGCACTT
CACTAAATGATAGCAAAGAAATTGAATCGGACATAGACGAACTTCATCTTCTTGAAAAAT
TGCACTCGGATCAGTTCAATTCGTCAACGTCAAATTCTTCAGATTCAGGAAGTGCCATAC
AATTATCAGATACACTCGACTCGAGCAATGACGACAATCCTGACCGAGATGTCATTAGTA
TTGAAGACTCTAGTTACTCAGAATCAGAAACCCAAAAGCAACCAGACAGCTTATTTCAAA
TAGATGAAGTTATGAAGAATGAAACGGAAGAATCTAAGCCTGATAATAAACTAGATGACG
AAATGAAAGGCACTGTTGAAAACGAATTATCTTTTGCTGGAGTCAGGTCGCGTTACAAGA
CAAATTATACAAACAATGAACCAGTAGACGTTGTTCTTGCTTCCTCCTCCGATGACGAAC
ATATAATGAACAGCAAAGAGAGACCTGAGAATTGTGTAAATTTAAGTGATGATTCTATTT
CTAATACTGGCTCCGTTAGTGCTGGCGTTACTGAAAACAAAGTAGAACATGACGATATTA
ACGAAGCTGATAATAGTGCAGTGAGTAGTTTTAATATTCCGTGCTCTGTTAGCAATTGTG
TAGAAACCGAAAACATTGATATTTCGGAGAAAATTTGCGACCCAACCCAAGACGACAACC
CAATGAATTGCGAAACGGATTTATCACCTACAATCGAAAATGAAAATAATCTGACAAGTA
TTAATGCAACTGTCCAAGTTATTGAGAACAAAGAGAAAGGAAAGGAAGAAAACAAATTAA
GTGAACATTTATCTTGTGAACTCGAGCATCCCATTGGGTCCAGTACCAATGAAAATGAAG
TGGTCACAACCTCACATCACGATCCAATCGACTGAGTAGTGATAAAATAAATAGGAATAG
CTTAGTCAGAGAAGTTTAGTTTTTTGGATGGAACAAAAACCAGAGTATAGCAGGCTAACA
GTTATTATGTTAATCTCATTATTGTGTGTAAAAGGGTATTTTACTGGGGTCGTTTTTCTA
AGCCCCGTGTATTGTATATTGATCAAACAATATAAGTGCTAATAAAGTATTAAAAAAAAA
GTGTTTAAAGTTTTTGTGGCCGATGAGAGATAACATTATTTTCTTTCCCTGCTAAGCAGG
CAGCAGTGTGCCATATAGTAATGAATGGTGCTTGTAAAACTTGTCGTCACATATTATTTT
ATATTAAAATTATATTTCTTATTCCTAAGCATATTTTTGTGTTTCTTTATTTGATCAGAG
AATATAAATATTCTGTTAAT
(3920 bp)

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