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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12497_c0_seq2
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIH_subunit_3_[Papilio_machaon]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003684 F damaged DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006412 P translation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008135 F translation factor activity, RNA binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:7.98 TPM:8.03
ORF EntryO_BomoSK11039_complete:A_BomoSK_comp12497_c0_seq2
Sequence
(Nucleotide)
TCGGTGAAATGGTATTAAATATTTTACAGGATATTTTTAGAACATCGATTGTGCTCTTTT
AATTACTATTTGAATTAAAGTACTCACTTCATGTGACTTAATCATTAGCAATGGCAGACG
ACGATGTGCCCTCCGACAGCAGTCTCCTTGTGGTAATAGTGGACACCAATCCCAATCAAA
GATACATAATAGAGGACCCCAAAATGCTCACAAACGTCTTGGATGCTGTAGTAGCATTTA
GTAACTCCCATTTAATGCAGAAAGCTAGTAATGAACTTGCAGTAATAGGCTGTCATTTTC
ATAAAAGTGAATACCTGTATCCAAGTCCTGGTAAACCTCTCGATGTAAGACAAATAGATG
GACAGTATGAATTATTTACATTAGTTGAGAAGACCATCAAAATGAGATTAGTCAATTTAA
TCAAAAGTCAACCACAAGAAGAGAAACCCGGAGAATCATTGCTGGCCGGCGCTTTGGCAC
TGGGACTCTGTTTTATTGCCAGATCTCGACGTAGTGCCATTCCGGGTTTAAGGACTAGCA
GCCGTATCCTCGTGGTCACGGGCAGCGCCGACACCGCTGCGCAGTACATCAACTACATGA
ACGTGTTCTTCACCGCACAGAAGGAGCAAGTCCTGATCGACGTGTGCTCTGTGGACAAAC
ACTTGAGTCTGCTGCAACAGGGTTGCGACATCACGGGCGGCCTGTACCTGAAGATACCGA
GCTTGGAGGGCTTGCTGCAGTACTTACTGTGGGTTTTCCTGCCGGAAGCCAATGAGAGAA
GTAAACTGGTACTGCCGGGGCGGGGCCGCGTGGACTACCGCGCTGCCTGCTTCTGCCACA
GGGAACTGCTCACCATCGGCTACGTCTGCTCGGTTTGCTTGAGTGTTTTCTGCAAATTCA
GCCCGATATGTACAACGTGTCACACCGTCTTCAAAATAGGAGGACCACCTATCAAACCCA
AGAAGAAGAAAATGAAAGTTTAAATTGACTTTTACCTGCTCTTAATATTCGTGAGCCCTT
AATACTAATGTGTCCATACTGTGAAAATGAACCGGCAATATTATAAAAATTAAGTATTTA
CTGGTGATACGGCATATTGTAAAGTCCGCACGAGGAGATACTACAATTCAACCTCTTTCT
GCCGCTAAGCAATCCTGAGGTCCATGTCGATGTCTTAAAGTCAGGTGGACCATGAGCAGT
AGCAGAACTATTCGAACTGTGTGTTCAAATAAATGTGTCACGAGCCAGCGCTTGAGTCAA
TTGTGCCTCTCTATCGCTTGTTCCGC
(1286 bp)

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