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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12485_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101736037_isoform_X1_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006979 P response to oxidative stress
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.05 TPM:3.07
ORF EntryO_BomoSK11011_5prime_partial:A_BomoSK_comp12485_c0_seq1
Sequence
(Nucleotide)
TATGTCCCGAACATCGTACTACATTCTGTATTTTTACCGGGTTTTTGACGTTAGAAATTA
TGAGCACCAATCGTAGCTCTATTCTGAAACATGGCCGCATGGCTAACTGACAGCGGCCCG
TCTGATATTACTGAACAAAACAACTTGTGTACGTTTTTAGTAGAAAAAAGTAACTCAAAC
ATAAGAGCAGACTTAAATTTAGAAGCATTCGATAAGGAGTTTAAGAGGTTACAACCTTGT
GGATTCGAGAAAAGTGCGTTTGTTTCTGCCGTGACGTCGGAAAGTGTATACAATCATAAT
AGTGAAGTTTCAGAAGGAAAAACTCATTTGGAAACGCATGATGATTCGTCGGGAATGTCG
TCGATCAAAATCGATTCTCAGAAGCATCAAATGGACAAAAACAAAAGGAAGACGGAGGAC
AACAACGCCCGTTACAGATGCGAATACGACGGCTGCGAACGCACTTACAGCACGGTGGGC
AATCTGCGGACACACATGAAAACTCACAAAGGTGAATACAGGTTCAAATGTCCAATGCAG
TCCTGCGAGAAGGCCTTTCTAACATCATACAGTCTAAAGATACACGTCAGAGCGCACACG
AAAACAAAACCCTTCATTTGCGACAACAGCTCCTGTGGGAAGGCTTTTAACACTTTATAC
AGGTTAAGGGCGCACCAGAGGCTACACAGCGGCGACACGTTCAACTGCAAATCGGATGGA
TGCGCGAAATACTTCACGACCCTGAGCGATCTCAAGAAACACATTCGGACCCACACAAAA
GAACGACCCTATAAATGTCGCATGGACGGTTGCGACAAGTCGTTCATAGCGTCTCACCAT
CTAAAAGCCCACGGTCGGACCCACGCGCCTCCGCGGCACTTCGCGACCTTCGCCAGCGTC
AGACCACACGTCGGCAAGCAACAGGCGGAAGCGGAAGTCGGAAACACGGAAGTAGCGAAA
CCTCTGAATCCGGAACCGGCCAAAACCGATATTATGTATTGGGACGGCCTGTTAGAGTCG
TTCGGCAGGATCACGACAGAATCTAATTCGACCGACGGGAGCCTGGAGGACGTGACAGTG
GTCAACAACGAATATATAACCGAATGGCTGTTCGAAGGCTGCGCACCCAAAGACGCATCA
GCCTACGACATTAACAGTATTGCGCTGTCGCCCTTTGACGTCAACAAAACCGATAAAAAA
TACGAAAACACTTGGGTCGACGTTAACGGGATCCAACCCACCGTCCCGGTCGACAACGGT
AACAAACTCGAAGTCAGGTCCAAGGCAATCCAGCTCGCCCTGGCCAACGAGGTAGAGCTC
CAAGCGCCCTGGGTGGACGTGAGCGCTTTGGCCGCTTCCATATCCGAGACCCCGGTCACT
ATTAAAGAGAAATCCCCCGAAAGCATATTCACGCTGGCCACGTCCGTCCCCACCCACATG
CAGAGCTACATCGACCTGAGCGCCGAGGGGCCCACCGCCCACGTCATGACACACGCGGCG
CTGGCCCTGGACACGCCCAGCGTGCGCGACGTGGCCGACGGGGTGTTCAACGACAGCGAG
ATCGTCACCAACCTAGAGCCCGGCAAGATCGACGCCGACCTGGACTTGTTCTTCAAGTCG
GACGACGACCGCTCCCTCAACACCCCCTCGCCCTCCAAGGTGCAGCAGAACATCGAAATA
AACCCCGCCAACTCCGTGCTCTTCAACACCGACTTGGATCTAGAGGACACTCTGTTGTTC
GACAACGAGCCGCCCTCGGACATGTACGTGGTCCGAACGGAGAACATATTCGGTAAAGAG
ATAGCGAAGAGGAACGCTCTGGAGCAGGTGGCCGCCGACTGCGGGATCTGCAGCTGCGAG
GGCTGCACGTGCAACTCGGAGGGCGAGTGCAGG
(1893 bp)

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