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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12417_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_oocyte_zinc_finger_protein_XlCOF6-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042254 P ribosome biogenesis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071294 P cellular response to zinc ion
Transcript
Level		FPKM:13.52 TPM:13.60
ORF EntryO_BomoSK10893_5prime_partial:A_BomoSK_comp12417_c0_seq1
Sequence
(Nucleotide)
CTCGTGCGCGGCGGGCGCGGTCTCGGCGGCCGCCTCGGAGTTGTTCGCTTCCGACTCGCC
CTTGTTCTCGTGCGAACTCATGTGTTTCTTGTACGACCTTGCCTCAATGAAGCTCTTCCC
GCAGATCTGACAGTGGTGGTTCTTCTCGCCGGTGTGGTACCGGCGGTGCACGGCCAGGTA
CGAAGCGGAACTGAACCGCTGCGAGCAGTACGTGCACTCAAACAGCTTCTGCCCCGTGTG
CTTCGTGATGTGCACCCGAAGCTCCGTCTTCGAGGTGCAGCCCTTGTAGCAGATGCTGCA
GATGTACTTCTTGTGCCCTGTGTGCGTGATCATGTGGTTGTTCCTGGCGGACGAGGTGGT
GAACTTGGCCGAGCAGAGCTTGCAGCTGTACGGCTTCTCCCCGGTGTGGATCCGGTTGTG
ATAGATGAGCGCCGACTGCTGGGCGAACCGCCGCCCGCAGTACTGGCACTCGTAGGGGCG
CTCGCCTGTGTGCACCCTCATATGAGCGTTCAACTTGGAGACCTCATAGAACGCCTTATT
GCACACGTTGCACACGTGGTTCCTGATGCCCCGGTGCTTCTTCATGTGCTGACACAGCGT
GGAGTGGCGGCGGAACGTTCTATTGCACTCCGTACATTTCAATGGCTTCTCGCCGGTGTG
CAGTCGAAAATGTACCTTCAAATCTGTGGGATTGTAGAAGCTCTTGTTGCACATGGAGCA
GACGTAGGGCCTCTCGCCGCGGTGGCGCGCCATGTGCGACCTGAGCGCGTACCCGCTGTA
GAACCTCTTCTCGCAGACCGTGCACTGGTGGGTTTTGGGTTCGAAGTGGGTCTGCCGGTG
GCGGTACAGCAAGGTTTTGGTTGCGAAGGTCCGCTGGCAGACGGAGCAGGTGGGCTGCTT
GGGAGGGCGCTCCTCGTGCGTGCGCATGTGCATTTTCAACATCCCCGGACCCTTAAAAGT
TCTCTCACATATCGTGCACATGGGCGGCTTCTTGCAGTTGGCGCGGATCCAGTTCGTGTG
CGACCTCATGTGCTGTTTGAGCCAACGCGAGTGCTTGAACTCCTTGTGGCAGAGGTTGCA
GACGTGCCGGCCCGGCGTGACCGTTGAAGTCGCTTGGAACACCACCATCTGAAGGTAGTT
CTCCTCGTCGGAGTTCAAGCCGCTGTCGTCTTTCGTCGGCGGCGGAGGCTCCGAATCAGT
CTTTACAACTTCAAAGGTTTCGGTTGTGACTATCTCCTCTAAATTATGATGTTCTGGTGT
CGAGAAGAACCCTTCCAAAAGTTGATTTGGGTTCGTCAGTGGATCGTTGTCCGTCGTTAG
AGATATATACGAAGGGTCGGTCATCGTTAGGAGCTTCTCTTTCTCTTCGTTCTCCCTTTT
AATGGCCTCTTCGGCCAGGTGCCTGGCGTATTGTTCTCGTAAAGTGACGTCATTTCGCTC
GACCAAATCCTTGAAGGCGTGACAGCGGGATATCTGGTGGACGCACTGCAAGCACAGCTG
CGGGGGAAGACCGTCACCTACCGCCACCTGAATTTTTGATATCCCCATCAACATTGTGGC
GGTTAATTGCTCGAATAAAGGCCTCATATCCTTTTTTATCTGCAAACAAGCACGGCATAT
TTTTTCGAAATTTAAATTCTGTGTTTTATTGAACGTGGCCATTTTGGGCAGCAGTCAGCT
TGAGCTGTTTTTGTCCTTGTTATACTACAACATTATTGATGTCATAATTTTAATGAAAAT
AGCCGTGGCGTTATTTCTATATCACAAAAAGCACTGAGTATTGAAAAATCTGCCCATTTT
CAGTGAAAGCATGAACATTTTATGTTTAATTCACAACACAACACTGCACAGTTGCGAAAC
TG
(1862 bp)

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