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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12403_c0_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_cell_division_cycle_and_apoptosis_regulator_protein_1-like_[Amyelois_transitella]
Ontology
GO:0000790 C chromatin
GO:0000993 F RNA polymerase II complex binding
GO:0004857 F enzyme inhibitor activity
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0009411 P response to UV
GO:0016055 P Wnt signaling pathway
GO:0030308 P negative regulation of cell growth
GO:0031647 P regulation of protein stability
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0042752 P regulation of circadian rhythm
GO:0043065 P positive regulation of apoptotic process
GO:0043086 P negative regulation of catalytic activity
GO:0044609 C DBIRD complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:1902230 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000003 P positive regulation of DNA damage checkpoint
Transcript
Level		FPKM:6.64 TPM:6.68
ORF EntryO_BomoSK10869_3prime_partial:A_BomoSK_comp12403_c0_seq2
Sequence
(Nucleotide)
TAACGAATCATAAACCAATAACCATAAAGTGTTGATTTTTTCGAACGCAGTGGTTAAATT
ATTGCGGCTAAAATTCATAGAAATATGCAATCTGGAAGTGGATCTAAAAATCCTCCATGG
GCTCGATCAAATGTGAATACAAACATGACGGGAATAAACCCTCAAATAATGGATCCCAAC
GCCATGATGACACAACAAAGCATGATGCCCTTTCAACAGACTCAAGCAATGTTTAATCCT
ATGCAAGCCCAAGGTGGTATGGCAATGCAAATGACAGGACAAATGCCTATGAATCAAATG
GCTCAAGGTCAAATGTTTCCCGGTAATGTTGTGGCATATCCAACGCCGCGTGCATTAAAC
CCCGGTATCTATCAAAATGCACAAAATAACCAATCATCAACAACTGAACAACGTGTATTC
ACTGGCACAATAACTAAAACTCACAATGATTTCGGTTTTGTGGATCATGATGTGTTTTAC
CAAACCTCAGTATGTGCAAAGGGTATTATACCCAAAATTAATGACCGAGTACTCGTAGAA
GCAACATTCAATCCTAACATGCCATTCAAATGGAATGCTACTCGTGTGCAGGTCCTGCCT
AAAGCGGGAGCTTGTCAAAAACCTCCGCCTACCAAAAGTAACTCTTATAATGCAGTACCA
CCACCATCAGTCGCAAGGAAAGCGCCTCCATCAAGACGTGATGAGCGTCCCACAAGAAGA
GATGACAGAAAAAGATCCAGAACAAGAAGCAGAACTAGGTCTAGAGATAGACGTGACAGC
CGTGCTCGTAGAGATTCACCTCCTCCTAAACGATCAGTTGTAAGACAACCATCACCAATT
AAGTATTCTGTGAGAGTTCCCCGCATACCATTAGATATACAAAAAGTTGATGTCCCTGCA
TTGTCTCAAAGATACACAAACTTATATATACCATCTGATTTCTTTTCTGCCTGTGTGAGG
TGGGGAGAGACATTTCCTCCTTCTACACCACTGTCTCTCAACAACTCTTGTAGCTACCAT
ATTATGAGTAAAGAAATCGAGAATCCAAATAAAAATGACACAGTATTGGAACCTCCTGAT
GCAGATTATAGATTTTCAGCTAAGGTAATGCTAATGAGTATGCCGACGTTAGAGGCATTG
TACCAAAAGTGTGGACTTACAAAATTAGAGAAAGAAGAAAAAGATAAGCGCCCAAACAAT
AAGACTGCACTGCATCCTACACGCCTTATAAAATTCTTAGTGGGACAAAAAGGGAAAGGT
GGCGAAAATTTTGCAATTGGGGGACCATGGAGTCCTTCATTAGATGGTGAAAATCCCCAA
ACAGACCCAAAAGTATTGGTTAAAACAGCGATACGAACATGTAAAGCATTAACAGGCATC
GATTTATCTTCTTGTACACAGTGGTACCGAATGGTGGAGTTTTACTACTGGCGCGAGGGC
AGCGGCAACAAGTCGCGGCTCGAGTGTGTGGTGTTGTTCCTGCCAGACGTGTGGTCCGCA
CAGCCTTCGCGTATCGAGTGGAGCAGCGTTCAGGACCAGTATAAGGCGGCGTGCGATGCG
GCCATCAGGAAACTTGACGGCGCCAGCTCGACTGTAGACAAGAAGCAGCCGTCTGCGGCG
ACTGCTGCGGGGGCGGAAACTGCGGCCGATGCAGAAAATTGCGAAATTGAAGCAACAAAC
GTTGATGATGGTACAATAACAATAGACGAAAACGATGAGGATATCAAACTTGATCTTGAA
GCAATGAACGCAGAACAATTGCGAGAAGAATTAAAAAAATGTGATTACAAATCTAAGGGA
TTACGATCTCAAATAATTTCACGTTTGTCGGAACTTTCAAAAACCGACAAAGAAGATGGA
GGGGACGTCATGGATCTAGAAGATGATGAGAATTTAGAAAACAATAGTCATGAAGACAAC
ACAATTCAGTCACAAAATGAGGAAGAAGAGAATAAAGGGGACAACATAGAAGATGAAAAA
CCGAATGACGAAAAACAGAATGAACCACAAGCTAATTCTAAAAAAGACGAGGGAGAACAA
AAAGAAATAAAGAAGACAGATAAGGAAGTAGAAGAAGAAAAGAAAAAAATTGAAAAAGAA
AAACAAAACCTTAAGTCCCGTTATGAAATACCAAATTCACCACACATTTTGGTGCATCCG
TCAGCCACCGCTAAAGCCGGTAAATTCTGCTGCAATGTTGCAACCCTGTCGTGGATGCTA
GACTACAGGGTTACCGACAACAAGGAACACAGCTTCGAGCTATTTGTATTCGCGGAGCTT
TTCAACGAAATGTTAATGAGGGATTTCGGTTTTTATATTTATAAAACCTTATATACACTA
CCAGAAAAAACTGAGGAAATCAGTGATAAAAGTTCTGATAAAGCCGAGAAGAAGGACGAA
AAGAAAACCGAGGAAAAAAAAGATGAAAAAAAGGATGATAAAGATAGAAAAGAAGACAGG
CGTGATGAGAAACGTGAATCGCGTGACGACAAACGAGATTCTCGGAAACGAGAAGTAAAA
GATTCTCACAGCGATGATGAGGGTACTGGCTCCCCGAACCGACGCAGTCGCGGTGTTGAG
TTACCTCCAGATCCGTATCTACTTCTGTCACTTGTGTATTTTGATACAGCTCGAGGTGGA
ACAATGACCAAAAAAGACCTACAAAATTTATTCATGAGCCTCGGTTTGCGCTTATCTCGA
TCACAAATACGCTCCATATTAGAAAAAGTTTGCATCAAAGAACTGTTCAATTACAAGTAT
TTAATAGGAGCTATCAAAGATCTGTCTTCAGGCTCATCAGAGGTAATACAAGATCTGCCT
CTAGAAACAACAGTGAGTTCTGATGATGTACCATCACATATCACAGAGTTGGAAGAAACT
ATTGCAGCTGGTAACCGTCTCTTGCTGCCTGTTTTCAAAGATTCTAATGAAGTAGATGAA
GAAGATGGCTCTAAGAAGACGATCGATATTTCTGACTCTGGTATCGTGAGCTACAAGAAC
CGCGTAGTGGACGTGGGTGCACTGGTGAGCAGCACGTCCCGCTGGGCGGCGGAGCGCGCG
GCGCTGGAGCGAGCGCTGGA
(3080 bp)

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