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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12339_c0_seq3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_SH3_domain-containing_kinase-binding_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042981 P regulation of apoptotic process
GO:0043005 C neuron projection
GO:0045202 C synapse
Transcript
Level		FPKM:5.70 TPM:5.73
ORF EntryO_BomoSK10738_complete:A_BomoSK_comp12339_c0_seq3
Sequence
(Nucleotide)
TCGATCTATCGACGGTTTGCGCTCAAAGGATTAATATTATCAACAAAAGAACGACATAAG
TCACTGATGTTTTACTAGATTCATTATAAATTACACAAAGTATAGGTACATTTTGTGATT
AATAAAATAGGTAAGAATTTTTTTACAAAAACACTGATTTATCACTTTACATATTTTTGC
AAATATACTCAGAGGCATAATTAGATCCATTAGAAATTACCAAACCTAATGCAGCGTAAT
AAAAATCTGTTAAGATTTTATTTGTGCTCATTATTGACTCTATTCCGACGTAATAAATCC
AGATAAATATCCAGTGTAATTCCGATCTATCAAAGCAACCAAATTGTACATTACACCGGT
CTACGCGGAGGTTTCGGACAATAGTAATAAAGTTATAATTGTATTTACTCTGCGAACAGA
ATTAGAATAGAGTAGACCTTCGCTAAACATTTTTTTTAATTTTTTTGTAAAATTACTTGA
ACACAATCGCGCATTTGTTAGTTTTATTTATCCACTAACGACCAGGTTCCTTTTTTACTA
CATTTTTTTTAGCTATTCGACGTCGAGAGTTTATTGACGTTCCTATTATTTACTACAATC
TCTTTAATTAAAAAAATCAGGTTTTTTTTTTACACTAAAAAATCTAGATCATATTTTTCT
AGCTAAAACGTTTATATGATTTGTAAACTTTTATTTAGGACGCTAGAATGAATGATTCAC
GCAACATGTTTCAGGTGAAAATGTATTGAACTATTTCCGATCTATGCCTACCGTATATAT
ATAAACGCGTTCGCTTCTACAGAACCCACAAAACCAGCCACGGCGACTACAATTCAATAT
TTACTAGACTAAATGCGACTGTGGGACCAAATATTATTTAATAAAAGTCACTTTTGAAAC
ACTTCGAAGACACAATATCTAACAAGAATTTCGTTTGTATTATGCGGTAGACAGCGGCTT
GGCTCTGACCAGGGGCGTTGCTGAGGTCCATGGGCGACAGTAACTACTCACCGCCAGGTG
GTTATGCTCGTCTGCTTACAATGGCAATAAATAAAAATCTACGCCTAGTTTCGATTTGTA
TTTTACGACAGAAAATTCCGTTCTACTATCAATTGCGCCGTTGTCGGAATACCTCAATCT
TACAGGATTCAATTTGAACGATACTTCAACTTCAGGATAACGCCACTCACTACACTTGCG
TCACGCAGTGTGCAAGTTTCTCTATTTCGGTCTGAAGAGCTTGTCGTTTCTCGGATTCAA
GTTTCAATTTCGCGTTCAGCTCCTCAATAGACGCCTTGAACATGCTGTTCTGTACTTCTA
TTAGTTTCTCGAGGTTCGATATCCTGTAGTTGAGCTGCGCAATGAGCGCGTCGGTTCCAT
CAGCCGGGGGCGCCTTCTCCCCCCTGCCGGGCTGCGGCCTCCGCTCGAGAGTACTGGACG
CGCTGGTCCTGTCACCTCCGACTGCGGCCACCGGCTTCTCGGGCGACCTCTCCTCGATCC
GTTCCACTCTCTCGACCGTACTAGACTTCTCGAACACACTGGATGTCTTCGTAGAATTCA
TTTCGATTTTATCTGTAACGTGCTTGTCGTGTTTGGTGCTGGGTGCCTTGTCGGTGGGTG
CGGCGGGCGGGGCGGGGGCGGGAGGTTTCTTCACGTCATCAACCATCGATAAAAATGTTC
GACCTGCGGCGGTGGGGGAATGCATGACCGGTTTAATGACAGGCACCGGATCAGGGGTAC
TCCTATCGGGCGTTTCCTTTTTAGAATCCAACGAGTGACGTACCTTCGTCTCTTCGAAAC
TTTCTAGAACGCACATTCGACTGGTGATTGATGAGGTGCTCTTAGACATTTCCATAGAAT
GCGTTGATCTCTTCTCGTCCAAACCGCATTCCAGGATTCTGTCGGTGCTCCCGCCGCCCG
CCCTGCTGGCCAGCGCGCTGCTCTCTGCCGAGCTGGAGACGGACCGCGCCTTGCCGTCCG
CAGCGAAGCTGGTCTTCTTCGCCTGGTTCAACTTCAACTCCTCCATCCAGGGAGCCTTGT
GCTTCTCCCACTCGCGGGCGCGCGGTTTTATCTCTTCCGCTTTCTCCGGCGGGGGCTTTT
CGCTCGCCGGTACTTCGTGTCCGTTGCTAAGTCCTATTTGCTGCGGCGTGTCGTCGCGTA
GGACCTGACTAGGTGGCCGTCGTCTTGGTGCTTTGACTCTGCCCGCTCTAGGATCGTTGA
GTATGGAGTTACGTTCGATATTGTCGAACGTACTATTGTTGGGTGCGTTGATGTTGGGCG
TGTTGGTGTTGGGCGTGTTGGTGTTGGTCGTGTTGGCGTTGGTCGTGGTTGCTGCGTTGG
CGTTGGGTGTTGGCTTGCTGGACGTAGCGCCGTCCGGTCGGTCCGAATCCACAACAACAG
GCGTCGATTTTTCTTTGTCAGAAGATGATAGCATTTTATTCTTCAGTCCGCTGAGCAAGC
CTCCGACCCCGGATACGGGCGTCGGACTTTTCTTTAACGGCACCGGCGGTTTCTTTACCT
GGCCGTCGATACTTCCGTCTGTAGCTGCTTCGTTGTGAATAAATTTCTCAGTTTCATTCT
TACTTGTGTGCGTGACTGTACTATGTGTGCTAGTCTCTTTGCTGAGAGGGTTGTCTTTGT
GCATACTTATCTTAGACGTAGTCAACTCCTTGACCGAGGCGGTTTTTTCTGTGTATTTAT
TGAGTATGGGATAAATCGAGTTGGTTGCGGCTTTTGATGGACGTTCGGGTTTCTTCTCTT
CAACTTCTGCTGTGGCGGCAGGCAACAACTGTACAAAGTTATCGGGGAAGAGCCCGACGC
GACCGTGCAGTTCTCCCCGCCACCAGCCTCGATCGGGGGCTTCCTTCGATATAACAGTAA
CGATGTCGCCTTCGTTGAGGTTCAGCTCATCGTCGTTCACGGCAGCATAAGTGAACAACA
CCCGACATTGCTCCTTTACTGGCTTCGGTGGGAGCGCTGGAGCGAGTTCGAAGGGTGCCG
GCTGCGGTGGGTCGAGCATCACAACAAAGTTAGATGGAAACACACCCACGCGACCCTGGC
GTCGACCTTGCCACCAGCCCTCCTCTACCTCTCCTAGAACTTCAAGCACGTCGCCGACGC
AGAGTTCCAATTCATCCGGATTGACTGGTTGATAGCTGTACAGAGCCCGACACCGCCCTT
GCACGCCCGTTGATCTCGTAGTAGCATGTTCGTTTAGAAGAGAAACGAAGTTGTCCGGGA
ACATGCCGCGGTTTCCACGTAACTCGCCTCGCCACCAGCCCCCGGGCAATCTTTCAACGT
CGCGTATCACGTCCCCCGGTCTGATCGTCAGCTCGTCCGCTTCTGATGCATCATACGCGA
AGTTAACGGTGCAAGACACTTTTTGTGATAGATTTGTCTCCATTGCCGGCATTGAACACT
AATCACAACATCACGTATTTTTTATTTCATTGATCCACAAATAGCACATTTCAATTCTGA
TCACGAAATAACAAGAAACGATTCACAAATTAATATCGTATACAAGCGTGTGGAAAGCAA
AGGCTCACTGTTTT
(3554 bp)

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