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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12329_c0_seq2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		polymerase_delta_interacting_protein_3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0035145 C exon-exon junction complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0051028 P mRNA transport
Transcript
Level		FPKM:2.34 TPM:2.36
ORF EntryO_BomoSK10720_complete:A_BomoSK_comp12329_c0_seq2
Sequence
(Nucleotide)
AAGAGGTCCTACCACCAGTAATTTAATTATACTATTAGTTCAAACACTTATTTATTCAAG
GTTTATTGAAATAAAAATTAACATTTAGTGAACAATAAGTACCTTGTAATAATAATAAGA
CTAAACAAAATATGACTTTTCCCTGCAAGTAAAACATAGTGCCCAACGGTTATTTATTAG
AGGCAGAGATTTATCGATATCATACCTATGACTGTATTGATTGAAACCATGTGTGTTATA
CCACTCTATATATCTATAACACCCATACCCTCGAGTACTAATGGAACAAGGTAAAACTTA
AGGTATGCTTACTCAACAGCTTAACTGGATAGATTAAGCTAAAATTTGTATATTTACAAA
TCAGTTATGACATCCATTACAAAATGAAAACAACATAGTGTATCCTAATGCCATTTACTT
ACATGCACTTTACAGTATTCAATTTCTTAAATGCTGATTAATACTTTTAAATACAAATTG
AAAAATCTATTTCATTGTTGTCGTTTTTTGTTTGTTTGTTAATAGGCACACATTTCTAAT
AAACCACTATCAGTTGAGGAATTTTACATAACACTTTAATTATATCCAAACACTAAATTT
ACAAGAATCTAAGAATAAATCCGTACATCCTTAAAAAATTGATTGCAAGGGTTTTTTAAC
AGTATAAGCTGCAAAGCTTGCTATTTTCACAAAATAGTATCTTTTAGTGTTATTTACTGT
TATTACTACTTTTTTAGTGTGAATACATTTTAATAAACATAATCAAACATAGGAAACTGC
CTTTTCAACAAACCCAAATTTAGCCATAATATTCATAGAGATGTATTGATTGAAAAATCT
GTTACTTTTCCTTTTCTTTAGATAGAAGCGTAAAACCTTCTACAAATTACAATAACACTG
TATAAAATATATTATTACTGGTGTCGTTTTTGTAAATTATAAATTACTAAATAATACTTT
GTGGAACGTTGATAAGTCAGGTTCTACGTTAGAGTTAGTGCTGTATAATGCTGGTTTACT
GTTGTTTCTGAAAATAATAAAAGGTGACGTCAACATTATTATATATGTATATACCAAGTG
CAAGTCAGCCGTTTTAGATTTTTATTAAAAGACTTCCGTTCAACAGTAATACCTCGAAGA
AGAATTCAGTGTTCTAGGCACGACAAGTAAGCAATTCATAGGCTGTCCGTCTAGCTGTCG
ATTGTGATATAAATCTACAGCCCTCTGTGCATCTTCTTGAGTTTTATAAATTACTTCTGC
AGTACCGGGACGAACCAAACGCGATTCGACCATGCCACCTACATCTCCAAATAATTCCTC
TATATCTCCAGCTGTTACTGTGCTTTTCAAACTACTAACAATGATTCTAAATTCTGGAGC
CGTCTTGTCAGAGTTGTAAGCTTTATTGTTAGATTTGAGAGCAGCCATTGGACGTTTCTT
GAGAATCGAAGGTGGTCTTGGTGGGCTATACTCCCTTTCGCTTATGGCAGTTCGATTAGT
GGTACTGGGTGGTTTATCTCTTGCACCATTGTTGTGAGTAATTATTTTAAGTTGTAGACT
AGCTTTGCGGTTCAACAATTTTGTTGGAATATATTCTTCCCCCATTGGATCATCATCATC
ATCATCTATAATTTCTATATCATTTTCCACTGTTCTGAGAATTTTTTGGGGTTGTGGATT
TTTATGTATTTTTTGTGTACCAACTGCTTTATTTCCTACAAATCTACGTTTATTGTTGAT
TTGACGTCTAAGATTAGGTGTGTTCAGAGGCTGTGAGACAACTTGCCTGGATGTATCTGT
GAACACTCTATCTTTGTTGACAACAGTTCGAGTGAATTTGGTGGCCTTTGGAAAAACATT
TACAGGTGTCATTTGTCCTCTTCTTTGCATTTTGAGATGTTCTAGCTTCAATCTAGCATC
CCTCTGCTTTGCAAGTTCGGCCAATTTGTCTCGAGCATCTGTTATCTGAATTCTCTTCTT
TGATATTATTTTATTTCTAGCATCCATAACTTGTGGTTTAGCTTTGAGAGCTCCTTGCTG
AACACCTTGCTTTCCATGTTTATTTTGTCGTTTAGACCTGATGTTTATTTTCTTTTTCTT
TATGATTTCCTCTAAGCTCATTTCGATCAAGGACGACATGATTAATGTTCGAGTTTGGGA
TATGGAGAAGTCTTCTAAAGAAAATAGGTAGGTACAGTACAGTTTATTTTCTGGGGTTGT
ACAAACTTATTTGGAAAAAAAA
(2242 bp)

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