SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12327_c1_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:6.23 TPM:6.27
ORF EntryO_BomoSK10717_5prime_partial:A_BomoSK_comp12327_c1_seq1
Sequence
(Nucleotide)
GAGACCACACGCTGAGGCTGTGGGACATGAACGACTTCCCCGCCGAAGCATACGACGAAA
ACAAATACGAACCTTTAAAGAAAGATAAAAATAAGAAAGAGAAAAAGGAAGTAAAAAAAG
AAGATGAGACCGCCAGTAGTGAAGTGGCAACCCTGAATCTGGCAGCGCAAGACAAAACGA
AGTCGGCGAAAAGGTTTTTACTCCCGATATTGTGCAAACAAGCTTTGGGCTGTACGGACG
GCTTAATAAGGAGAATGTTTGAAAAGTATGGACTGAAATCATCCACGAGTCCGTTCACTA
TCGAGAGAGTCCAGGCTAGTTCAGGCGAGAATATAAAATGCGATGGAGTAGACAATGGAC
TTAATAGCGAAATAATAGAAGAAAACAAGGGTAAAGACTACGGTGCCGATTTCATTAAAA
TATTCGGAACTATTCAGGAAGTTAACGAGGTCTTAGATAAGGAACAAACACGTCATTTAG
AATTGTCCAATATTGAATCATGGATGATGCTGTCGATATTCCGGGGGCACATCGACGCCA
CCATACAATACGCAAGCCAAAACGATTTGCTCTGTCCGTATCTACTTAGTTTGACGCCTT
GCGTCTCGCTCAAGTACTGGAAGGATGCCACACAATTATATTTAGCACAAATAGATCGAC
TGGTAGCGAAGACTGAAGGTCATAAACTATATGAGAACAAGTACTACGGCGGGCCGGTGT
ACCGCAAGGCGCTCACGCGGCTGAGCACGCACGACGTGCGGGGCGCCGTCGCGACACTCG
CAGAAAACAAACTATACAAAGAAGCATACGTCCTTTGTCGTGTCAGGTACATGGACAGCA
TTGCAACACAAATTCTGCACCAATGGGCAAATTACTCCAACCTTTGCGGGAATTTTGAAA
TAGCCACAGTTTGTTTTATTGCTTTAGGAGATTTATCCGAAGCAGCCACGGTGCTCGCGA
AGTCAAAGAAACAAGAAAACTTGTGTTTAGCAGCGGAAATAGCTAAGGCAGCCGGTCGGG
CCACTCTAGCTGATCACATCGAGAAAAAGGCACAAAACACAATCCCATCAACTTCAGATG
AAACTGAAGAAATTTTGAAAGAACTCCCCACTAAAATGGAATTGCTTTTAAAGCAAAACA
ATAATTCAGAAGATAAGGCAGTGAATTCGGAAGACGAAGAGCCGGTTGGAAACTTAGTTG
AGTAAAAATACAGGGATTGACGACTGTTATGATTGATATTTTTTAATGTTGTATCGTGAA
AGGGTTTTAAAAATCCTAACTTTTCGTTTTATGAGTTTTGTGAAGTATTTTTAACTGTGT
ACAACGTGCACAATAGGCTTAAGCGATCAATGATATCTTGTGCACGATCTCGATTACAAC
TAAAATATTGTTGAGGCTTGAAATGATGAAAATATTCGGGTTATGCGTGTTACAGTCAAA
CTTTTTGTTTTTAGTGCCTGAAACTGAATGCATGTGGTTTTTTTTTTCGAAATAAAATTG
TAAAGTTATGTTGTATGTTAAGAGTACAGTTTTTTGTCCATAATCCATATATCCAAATAT
CCATAAATAAAATAATAAAATACTATATTAAGACTTTAACCTAATATCTCAACGTAGCTG
GTGGCATTTGTATTGTACTGTTTATGGGTTTGTTGAAACTCTATAAAGTGCTCACGTCAG
CGCGTTCTTGCATCAAATCGGCGTTAGGTAAATTAATATTAGTCCTGTAACTTTATAATT
CGCGCAGTTTATTGTCA
(1757 bp)

- SilkBase 1999-2023 -