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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12327_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		hypothetical_protein_RR46_03053_[Papilio_xuthus]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 F RNA 7-methylguanosine cap binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0036245 P cellular response to menadione
GO:0043069 P negative regulation of programmed cell death
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050072 F m7G(5')pppN diphosphatase activity
Transcript
Level		FPKM:23.21 TPM:23.35
ORF EntryO_BomoSK10716_5prime_partial:A_BomoSK_comp12327_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTGAAATTCCCAATTTAATGCCGTTTAAATTTTTAAGTAACTGACATGAAAACC
GTTGGAGTAACGGAACGATTCTGGAACTTTCGATGCCATTTTTTGCAAATGTTCGATGCC
TTCACTGAACATGTTCTTAGAGATCTCCGTATTAACCACAACTGGGTCCGTTAACCAATT
TTCCACTTCATCATTCAACGCCAACTCAATTTTGTAAAGTATTTTCGTAACAAAACTAGA
TTTCAATTCAATTTTATTGTTAGTAACGTTTTCTTTGTTCTTCAATACTTGTAATTCTTT
ATCCATTATCCAGATTAAGAGATATTGCTTTTTAGCCGCTGATATTGTGCATTCTAATAC
AATTTTACACATCACTGCATATTGGAAGCCAATTTTAAAATCTTCAGTTATACTTTCTAT
TGTTTGTATAAAATCATTTACATGTATGTTTTCAGGTTGGTTTTCGTAAGAAAATATATG
TACTTCTTTTTCATTGTTGTGTACTTTAACTTCAGAATTGTAAAGTCTGACAGTGTCTTT
GATTTTGAGACCGAGCCAAGCCAAACAGCGGCTGCAATGGTATACCTCCCTTTTAGAATT
AAATTTGTTCGATTTCTCTGATAAGATTGATTGATCAATAACGAAATATGTTAATCGATA
TAGGAAATCTAATTTATTTTGTTTTATAACTACATCTGCCACATTTCCATGGTCGTGTCC
ATGACAGAACCATTCTGTCATGTCCAAATTAGCTGAAGGCAATTCTAAAATCCTGTCAAA
TTTGACACAACCATCAGATAAAACATTTGAACAGTTTGAGCAAACAATTTTCAATTCTTC
ACTGATTTTTATATTGATTTTTAGATTCTGTTTCTTCACAGAATTTTCAGGTTTTCCAGT
GGTAAGTAATTCTGTATAAAAATTTCCACCATTCTTTGGTTCGGTTAGAATTCTGAACGA
AACTGTATTTTTGTCTATTCTCAAACATGACATTGAATTGGGAATTATATGACAAAATTC
TGATATCGGTATATAAGTGGACACATCGAGCTCTTCGTCTGTTTCATCATATGAATCTGA
TAAACTCTCGATTGAAGAAAGACTATCTCTCCGTTTGCTACCAAAATCTTCAATATAACA
ATTTAACACAATGCAATCGGATTGTATGCTAATTTTCAAATTGCAATTTTCTTTAGTAAA
ATCAACACCGGTCGTTATGTAAACGTTGCAGCTACGCAAACGCGAGCGTAGCTCCATAAA
AACGTTGTCAATCAACATTTTCACTTAATAATTAGTCTATAAAAATTATCTATTTAACAA
TTAGATCGGCGTTTTGTATGCGTTTGACTTGTCCGTTTGTTTCATATATATTAAAAATAC
TATCCATTTCTCTTATGGTGAATGGTAATGTGGCTTTCTTATAATAGTCGGGCATCATTG
TAATGTTGTCAATGACGGTGTCGAGTAGATGTGATTTCTCTGCATAGATTCCAGGGGCCT
CGTGGCGTAGATAAGTGAAATGGATATGCAGATGGTAGAAAGAAGGCTGGTAATGCAGAT
ATATACGCAATTGACTTCCAGGCACCTGATATTTTTCTAAAATGGTTTTCTTTCCCTCGT
CTCTAATCCTCTTTAACAATGGTAAATGCTGCTCGTCCAAATCTCTAAGGCTTTTTATGT
CTCTTTGTCTGACAATAGCCAATAAATACAATGTCTCTTTGGTAAGACCGTCCCACTTCA
GATCGGGGAGGAGCACAAATCCTTCCTTTTCACTTTTATTGTCATGTACAATTCTATCTT
GCTCACTTTTACCTTCTAGAATGTTGTACACCCACTGTAAATTGAACTGTTCTTTCTCGA
GATGAGGCAATGTCAGTTTTTTATATAGCTCTGGAGTTTCCAGCACAATATGAACTTCTT
GCTGGCTAAATTTGGCAATATGCTTATCAGTGGCTGGGTAGATTATTGTAGTTTTCACAC
CGTTTATAGTCGAAGGCGGGAAACACTCGAAGTTTCCGTAAATATCGTTCTCGAAAAACG
TTTTCAGCTGAGTTTCTTTGGAGAAATAACCCTCTTCACTTAGGTCATTTTCCTTGAAAG
CATTTTTTTCGAATAGGATTAGCGCCACGCCACTTTTGTCTTTGAATTTTCCAACCACAC
AAGCTGTTTTCCTGTTAGTGTTATTGTTCAATATTTTCTCCAAAACAAAGTCTTTCAATT
CTAACTGATTGTCATTTAGATTGTTGCCGTTTTCATTGTCAATTTTCAACCTTTTACAAC
GCTGCTCGCTGACATCGTCTTTTAGGCAGCCG
(2312 bp)

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