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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12311_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0035191 P nuclear axial expansion
GO:0043035 F chromatin insulator sequence binding
GO:0046872 F metal ion binding
GO:0051493 P regulation of cytoskeleton organization
GO:0090202 P obsolete gene looping
Transcript
Level		FPKM:8.49 TPM:8.54
ORF EntryO_BomoSK10677_complete:A_BomoSK_comp12311_c0_seq1
Sequence
(Nucleotide)
GCGCCATCTTACGTATTCGCTGTCAACTTCGGTCAAATTTAGTGAAGTAAAACTGTGTAG
AGTCGTGTTGAAGTCAAGTAATTGAAATACAAACTACGATATTTTGATTTTCACTCGATG
AGATATATATACTGCAAATATAACCTATAATGAAAAAACATTGAAACCGCCGCTATGTCG
GAGTTAAGGCAAGTGAAAGTGGATAACTGGGGAATTTATTTCCTCCAAAGGTTAAAACAT
TTCTTTAACCGCACTGACTATTGTGATTTAACGCTACAATTCCAAGACAACGCACAGTTG
AAAGTCCACAGACTGGTTTTAAATGCTTGTACAGAATATTTTGAAGTTTTGGAGAGAACA
TGCGAAATGTATGAAGATTGTCTCGTGATGCCGGACGATCTTCAGGCTGATGTCGTTGTA
CCTATAGTGAACTTCATGTACACTGGACAATTAGAGTTCAGGTTGGATTTACTTGAGAAA
CTTTACCAAACTTCTCTCATTATGAAAATGCCTGTGCTAACTAAACTTCTGAAAGCTCAC
CGTGCCAGTCAGAATCCACAGTGCTATGCTCCAAAACATAAAAGCTCTGAACCTACTCCA
TCTACTAGTAATAAACGCTCATATGGTAAAGCTTTTGACAACAAGAGTGCATGCAAAGAG
AAAAAAGTATATAAACCTGTGAATATAAATAAAGAAATAATGTACCGTCCATCATCTCCT
TATATACAAAATAAAAAAAATCTAATGACAGATCCAAAACCTACAAGATATGAGCTATCA
GAAGAGTTTGATGGTGATGGGGTGTTTGACAGTTCCTTCTGTAACATATCCTATACATCT
CAACCGTTGATGGTACATCCTGACACTAAGAAGCGTTACTCTAAAAAAAGTGGTCTGTTC
AATAATTCTTCAAGTGATAGTAAACACACAACAACTTTAGACATTATAGAATGTAAGAAA
AGTGTTGATAACATCTTTGAAGATAATTACTTGGAGAGTGGTATACTTGATGAAAATGAG
ATGTTCCAAACAACATATTTAAAGAAGAATAAACCAATTATGGACTCCAATCAACTCTTT
GATCAGATTTTAGATCAGAATGATGCTCCTAAAATAACAATAGACACTAAAAACAGTAAA
GTATCTGCAAATCTTGATCATGCTAAAATAATAAGTGAAGTTTTAAAGAAATACTCTCAT
TTATTGAAAGGTAGTAAAAATATCAAATTGAAAATATTAAACACTCCAAACAAAAAGAAG
CAATCCACTGTTCGTGAACAGAAAAATTCTCAGCAGAAAGTTGAAAGACATGATTCTAAC
TTCACCTATGAGACTGATGTCATAGATTCAAAGCATGCAGCTAAGTTAATAGCAATGGGG
GCAGAGAACATTAATGGACCTTGGATATGCCTTATATGTGGAACACCAGGCAAAGCATTG
CATTTTATGTCATATTATAAATTCCGAAGACATCTAGTTGAAGTGCACAATGAAAAACCA
GTAGTCAATATATGTGAATATTGTGGATATAAGGCATTAAAAAGAAATTATCATCTTTAC
CATCTATATACAAAACATGGGATTGAGCCACCACCAACATATAATTTCCCAAAATGTAAT
CAATGTAATTATGTAGCTATGGGTGAAGGATATTTAATGAAACATAAGTTAACACATTCA
ACTGTGAGCTTTCAGTGTAATGTTTGTGCTACACACTTTAGTTCATCAAATTTACTTCTC
CAGCACATTCAAAGGACAGGTCACAAATATTCTGCTGATAGAAAACACAACCTTCAATGT
ATGTATTGCCTAAAAGTCTTCTTACGTGAAAGCAGCCTATATAATCATCTGAAAACATGT
CACAAAAAAGAGGATAAATCGAGTGGCATCATTGATGACTCAGATGAAGAAAAATCAAAA
GATAAAAAACCTAAATTGGAGTTAGAGATTGAGATTCCCCCAGTTCGTTCACATGACTAT
GAAGAAGTTAATGTACACTATCAAATTCAACCAGACGGAAATATCCATGTTATTCCTAAT
GGTGAAATAAAAGCACCTTTAAATCAGAAGCATAAAATACTTAATCCTGAATTCAACTTA
GTTAAACCCAAACAAATATACAAAGAAAACAGTAACATAATTAACAATGTTACTACGTCT
CTGCAAAAAGGTCATGTTCAAGAAGACAATAGTAATGTTATTACAAATGAAGAAATTGTT
ATGATAGATGACAGAGAGTACATCCTGAAAGATAATCAGCTTATACCAAGATCAACCAAA
AATGCTGAACCAGAATTCATCATCCCAGAAATGTTGCATTCAGAACCAGTGCAACAAACA
TCTACCTCTACAACTCAGTTAGACTATACAAATTTAATAGAAACTGTAAATGAATCTAAT
GTCATCCTGAGTAAGCAAACAAACTTAAATCAACCCATCCAGTTTGTTGTTTCTAATGAA
GAAGAATATAAAGCATTAATGACTGCAAACCATCCAATTCTTTTTGATAATGGTGATTCT
AACAAAACGTTAGCTGTTTTATCCAACCCCCACACCTCCAATGTAGAATCAACGAGTATG
GAACTTGACAACACTCAGTCAAATGATATAATGATCATACAAGAAAATTACCCATTAAAT
GTAACAGAGTCAGTTGTAACGGACAATTCAAACATAGTAGTAGTTTATAGCCATCCTGTT
GATAGCACAAACAAACAATTCCAAATTCTGACTACACAAGGAATAGGAACACAGTTAATA
CAATCATCAGCTATAATTACGCAAAACTTCGAGACTGTCACTACTACTGCACCGGTCATG
AATGCTCACGTAATTGAGAGTCAAGAATGGGAAAATGACATAACTCCAATGCCTGTTAGT
AACAAACCAAATGCTGACTTAGAAAAAACTGGACAAAATACACCTCAAATGACATCTCAT
CAAAGTGTAATTGTTTCGCCTGAGGTTCAAGTCCCCCCTAAACCACCTTCACCAGTAGAT
ATGGATGTAGAAGAAACCATACAAAGTAAATTAATAAATGAGCCAATTCAGGAAAATAAT
GAAAAATGCACACAAAGTGAGACATTGCCGGCTACAACAATTACACCCATTACAGATTCA
AGCAATCCTACTCAAGGGACGATAGTGGAAAACATGATCATCAATGAACAGCTTACAGAA
GAATCAAGTGAAAATCTTCCTACAGTTGAAGAAAATCTAGAGAATATTGATAAAAATTCA
ACTAAATCAAAACTTATTCTAGATTGTAATACTAAAATGGGATTAAATGATATCAGCGAA
AACCTCATAGACAAAGAAGAGAATATTTGTAGTCCAACATTTACACAACAAACAGATTTA
AGTTTAGAAAATAATGTTGATTCTATAAGTCAAGATTCAGCTGAGGAAATTGTACAATGT
GAAGTATCACTGTCTGCGCAAGCAGTACCAAAAGCAGCTGAGGAAAAAATTCAAATATTG
ACATCAGAATGGTCAGAAGATGAGTACGATTCTCCACCAGCAATCAATGATAATAAAGTA
ATTTGTGAAGACTCTAAAGAGATATTAACAAAATCAACTGAAACGCCTCAAAATATTGAA
GAGGGAACTGTGAACACTGAGTCTCTCTTACCTGAAAATTTAAATGAGCCAACTGAATCT
GCAAAACCTGAGAGCCCAAACAAACAAACAACTAAAATTCCAAATGATAACATATCATCT
CTGCTAAGTGACTGGGAAGACTCGCAAGAAGATTTGAGTAGCAATGACGAAAATATTGAT
AATATATTACCAAAAGAGTATGAAGAAAAATTGCGAAATGATTTACCCGATTACAATATA
CAAAATATTGATAGAGGTTTACCCAATCTGAATGATGAGAAAGATGATGAGGATCTAATA
AAAGTTAGCAAAGAAAAGGTACATAATGACCTAACAAACGCAGATGAGAAAACAGATATT
TGCTTGACAAAAGACAGTGAAGGAATATCTGACAGTGGTCTGCCAAAAAGGAACAGGGAA
GAAATGGGTGACCCTTTACATGTTAAGCAAATCGAAAATGTATTAGCAAATATAAATGAA
GGGATAGTTTCCACTGAATGTAATAATCGTACAGAAAAAGTTATTCTAGATGAACCAAAT
AGTGGACTTTTAGAAACAGCTGAGAAAAAAGCTTCACATGATCCTGCACCAGATAATGAA
ACCGATAAACCAGATGACAAAATAAAAAGTTTAGTCAGTGATTGGGATGATGACGATGAG
GAAAGTAAAATCAATTAATACTTAGCATCGAACTTTGGGGCTGAGTTCATACATAAAATA
TGTACTATGTAGTATAATGCTTAAATTATAGAATAAATAATGAGATATTTGTTATACAAG
AAAATATATTTCACTTTTTATCAAATCAAGTCCCATCAATGTTATTCTTAAAGTATTAAT
ATTATGATTAGTTAAATAATAGTAATTAGTTTGAAATAAGTACTAAAAAATCATGCACTA
AATAATTAAGTAATACCTAAAATTATATGGTAACCATATTGCTACTGGCTGAATCTTTTT
CTGAACCTAGTATGCTGTTTAAAAAAAAATTAAACATTGCAATGATATTTTTTGTATTCT
TTTTCCAATGGTTGTCTTGCATTTAACATTTAATTCTATTGTAAAAATAGCACCAGTTTG
GTATATAGTGCATTCAAATAACTAGTTCTAGCTGGTTTTTATTTTTAAAAATATGTATAT
TAGATTAAGCTTGGTGATTGTAAATTAGACTAAAGAATTCTAACTTTTACACAATTGTAT
TTATCTGTATAAGAGGACCATGAAACGAAACCATTGTGATTAAAAATGTGTATAAGTCCT
TCATCATGATCTGTCAAGTTATAAATATAAAAGCTAACTATGAAGGTAACTAAAAGCAAT
ATTACATAACCGGTCTATAATATAGAGTATTTGCTTTATAGTAAAATTAAAGATCGATGT
AATTAAGTCTATACGCCG
(4998 bp)

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