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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12308_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_rho_GTPase-activating_protein_44_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
Transcript
Level		FPKM:9.27 TPM:9.33
ORF EntryO_BomoSK10675_5prime_partial:A_BomoSK_comp12308_c0_seq1
Sequence
(Nucleotide)
GAAATATATTTTTTGTTTCTGCCTGAATATGTTTTAAATTCATTTATGTTGTAAAACCTA
TCATAAAAGCGATACATTTAAGAGTTTATAAATATATCAGTTAATGTGTTTGTCAATTTA
TTTTAACGATTGGAAATGTAGTGCCTTATTGGACTGTTTGTGTATTTTTTCCTTTGGGTA
GGAAGAATTTTATAGCAGCGGATGATCTCATTGACGTTCTGTCATTACGTTCTTTTTAGT
TAGATCTTGATCGTTTTGTTAATAAACGTTTTGAGTCCAATGACCTTGCGGCTTAAAAAT
AAAAATCATACAAATAATCAACCAAAATGAAGAAACAATTTTATAGAGTGAAACAACTTG
CAGACCAAACGTTTTCAAGATCAGGAAAAGGAGAGGCCCTAACAGATGAACTACATACTG
CTGACAGGAAAGTGGAAAACTTGCGAAATGCTTTACAGCTTGTTAGTAAAAGGCTTTCAA
CAGGTGCCGGAAATACACAAGGTCAAGATCCAGCTGCCAGAGAGAAAAGACTCAAAAAGC
TTCCAGAGTATTTATTGGGCTTGTCCTTGTGTGAAGCTAGCAACTTTGATGATGATGACA
GTATTTTAAAATTCATATTATATGAATGTGGTAAAACTGAGAAGTTCTTGGCTAACGAAA
TAGCTGAACACGAGTTAAAAGTGGAACAGTTGGTATGTGCACCTTTAACAGTAATCAGTG
ATCATGATCTACCAGCAATAATGAAAGCCAAAAAACAACTCAGCAGGCTAATTAGTGAGA
AAGAGTCTGCAGCAAGTAGATACAATCATTTAGATAAACAAAAAGAGGAAAATCCCACAA
AACTAGCAGCAGCCCGAGAGGAACTTGAAGAAGCTGGCACAAAAGTAGAGTCTGCACGAG
ATGCTCTTGCTGCGGATATGTTTGCCCTTGTAGCCAAAGAAGCTCAGCTTGCTCACACTC
TACTGCAATATGTTAAATTACAGAGAGCTTACCATGAATCTGCCCTACACTCACTACAAG
ATACAGTACCAGAGTTGGAAAAGTTTATCAACGATAGTTCTGTGAAACCAGTTTTTGGAT
ATCCATTGGAGGAACACTTGCGGGTTACTGGGCGCACCATTGCTTTTCCTATCGAGCTAT
GCGTCTGCACATTGCATGAATTGGCATTACATGAGGAGGGACTCTTCAGAATAGCTGGTG
CAACATCAAAAGTGAGAAGAATGAAGCTTTCACTCGATGCGGGGTTATTCAGTGTGCCTT
TACCACCGGATTACAGAGATATGCACGTTGTGGCGTCAGTACTCAAGTCATACTTGCGTG
AACTGCCTGAGCCTCTACTGACATATAGGCTTTATGAGAATTTTATGAATGCGTCACGAC
AACCGACAGAACAGGCCAGACTTAACGCCCTATGGGAGTGTATTCATTTACTGCCCGATG
CTAACTACCAAAACCTTAGATACCTAATAAAATTTTTGTCCGCTTTGACACAAAACCAAA
ATAAGAACAAAATGACGCCTTCAAATCTGGCCATCGTGGTGGCTCCCAACTTATTGTGGG
CCGCTGATGAGAGCACTTTCGATATGAATATCACAACAGCTGTCAACTGCGTCGTGGAGC
TCCTAATTAAACACGCAGACTGGTTTTTCAAGGACGAAGTTAACTTTTTCATTTCATTCA
CCAAAGAAGATTTGCTACCAGGCCTGTACCAAGACGGTTTCACCCCTAATTTCGGCCACG
GATACAATCAAACCGCCGCCCTCGCTCAAGATCAATCTAACGGCGAATACAGCAGCATGA
GCAAATCGATGTTCGATTATAACCACCACTCGGAACAGGTCAAGTACAGTCAAGTCAAGG
TCGCGGCCGACGGTCCCGGCCGACATTCACGGAGCAACAGTCACGACACCAGCCTCATCT
TATTAGAAAGTGACATCAAGAAGGCACAGTCCAATAGTTCCCTTTCCGACCAATCCAGCC
CGCCCCACGGAAGTCCCAAACCAATAACGAGGCGGAAAAACAAACCTCTCGCTCCGGTCC
CGCCAAATTTTACTCCAGACAAAAACAAAAAAACGGATACTCAAACGCAAACAACAGCCC
AAACTCAAGCCGAAACTACGAGAGAGATACAGCCCGCAGCGAAAACCGAAGTCGAGAAAC
CGGCCAAGCCACCGAGACCAGTCATATCCGACACCGGTAAGGTGATCACTGGGGTGCAGA
CGATCAATCGGTCCACATATCGGCAGAACAAGGCGCTCAAGGAGGAGGCCGCCCGCGAAC
TCGTGTCAGATGCGCGGCGACAGAGTCTCGAGCTAGAGCGAGACGGAACGGAGCTCTCGC
GAGCCGACTGCACCCTTGTCGTGCGTAACCTCACCGCGCACACCGGGGTCGTCGGCCGTA
TGAAGGTGGTCGGAGACGCCCGCTCCCCCCTCCTTGCTGGCAAGCAGCCCCCGCCTCGAC
CCGTAGCGGCACCGCGCACTCTCGTACCTGTAGCGACGGACCTCGACGCAGACGTCACCC
TGCGCAACAAGCCTGCCGTGCCCGAGCGGCCGGCCACACTGCGGCCGCAAAGCTTCCACG
CCCCTCGGGGCTCTTCTTCCTCTGACGTGGAAGTCGCGCCGACCGTGCTCGAGCGGACGC
ACATCTACACAGTGGACAAACAACAACCGACTGTGATCCAGGTGGGCGGCGGCGACGAGG
CTCCGCGGGCGACTGTGCAGCGCACGCACAGTTCCGGCGGTAAGGACGCAGAGCTCGACG
AGGGCAAGGGTCTGAGTGCGAGCCGGCAGCTGTCGCAGTCGGAAGGCAGTATCGCCGAGT
CTCCGTCGCCGCGCGCACGCCCGGCGCGGCCGCAGGTGCCAGCGC
(2865 bp)

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