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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12300_c0_seq3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_host_cell_factor-like_isoform_X3_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
Transcript
Level		FPKM:1.13 TPM:1.14
ORF EntryO_BomoSK10663_complete:A_BomoSK_comp12300_c0_seq3
Sequence
(Nucleotide)
GTATTATTTTTAAAAGCCTACCGAAGTTTTGATTAGATAGTATTTTATAGCAATGAAACA
AGTGTATAGTGTACTCAATAATATGTAATTAATAATTAAAAGCCAAATTACATTTTATAG
TTTTTCTTTCCATTAAACGAACCTTAAGCTTATTGCCACGATCACTGTATCACTGTATCA
TTAATACGGTCCAATGTCTCAATAACACTTATTGTACTTCATACCACTTCCCAAAACGTG
ACAACAAAACTATGTTGTGACAACGTCAGTGAAGCACGGTGGTAATTTTATGGTTTTAAT
TACAATTATCATTATTGCGCTTCTGCTCTCTATTTAGAACAAAATTAACATATTACTTTA
ACGCACACACACGGATATGTAAAAAACAATTTCATTATTTTCCTTCCTAAGTCAGTCGTC
TCCTCATTAAGTCTATAATTTTAGGCACAGCTTCTTAAGTTTAATGTGTCGCGTTTAAAA
AAATATAACGCAACATATAATGTATTTAAAAATGAATGAAAAAAAATCCCCCGGAAACGT
TTTAATATTTCCATTTAGAATTTTATTATATATGTATAGATATTGAGATTTCATTTCACT
GAATGTTACAAGACGAATCGTCGATCAGAATGTTCAACTAACACTACGATGTAACGAATA
CTTCTTATGAACTTATTTATTAAAATTTGCGGGTAGTCTTAATCAATCAAAAATAAAAAT
TAATGTACTATTTGTTTAGGTTGCTTTGATGGGGACGCTCCCGGTAACCTTCCCTCTCCT
GCTCTTTTCACACCAGTGGATTTAATATCTTGCAGCCACCTGACTTGCGTGGCGGGGCCG
TAGCCCTTCTCGTTGCGCGCGGCGATGCGGAAGATGATGGCGGGCTTGGTGGAGGAGTCC
ACGTGCGCCGCACTCAGCGACGACTGCGGCACCACGCACGTGTTCGCCTTGCCACAGTAC
ACGCGCACGAACGCCAGCTGCGACTTCGCCGCTTCCTTAGGCTGAGTGTTGGAGCGCACC
GCCAGGTAGACCGAATATTCGAAAATTCCTTCGGCGGCAACTTGCGGTGGTTCCCAGGAC
AAATGTGCGCCCTCTACTGATTTTGATATTTTGATAGCTGACGGCGCACCGGGGAATCCC
GGCAGACAGGTTTTGAATGCAGATTCTTCACTGAACTCTCCTCGGCCGCAAGAATTCACA
GCAGCAATTCTGAACTTATAGGCTGTGCCATGCTCTAAGGGCGTCGTCGGCAGCCCGGTC
AAATCGGGAAGACTGTCTAAAGATAAATTAGACAAGTCTATGTTTGGATCCGATATATAA
TTTTGAACCGTAAACGTAGTTCCTTTGACGATGCCAACCGTGTACCAAGCGTCCTCGTCG
TGTTTCTTGGGCTCTTCTGGTTCGGCCTGTTCGTGATGGTGAAGAGCAGCACTGGCGAGT
GTGGCAAGAGCGTGCGCAGCGATGGTGGAGGGGAGGGTGCTGCTCACCGCTCCTTCCGCC
TCGCCGCTCGCAGCGGACGCCGCGCCGACATCACTTGCCGCATCCGCCGCACATGCCGCA
CCAACCGATGACGACACCGACGTCGCCCCGCCCTCCTCGCCTTGGATCGGAGTAGACGTC
GGCGTCGAGGTCGGCGAGATGAGTGCGGCGGATCCGTTGGCCGTCATGGTGAGAAGCGGC
ATGGACGACTCACTGCCCGCGGGTGCCGTGTCGGCGGCGCCTTCCATCTCCGAGGTATCA
GCGTCGCCGAACCTGCTCGATAGAAATTTGAGATATTCGTTTGTGGTCTGCTGTTGAGGA
GTGAGCGAAAACGAATGTACTATGCCTGGACCATTGGCTGTGGATGATATTAATGACGGC
TCTGTTTGGCCGCTGCTTGAAATGTCTGATCCAGGTTCTGCAGTGCTCGAGCTTATTCCA
GTGCTGAGTATCTCCTGTGCGGCACTACTAATGTCGTTGACATCATCACTGCTGGCAACC
CCTCCTTCAGCTATATCTTCATCCATTGTACTTGATTCATCATCTTGAACGCTTGGTGCT
CCTTCAACTTCACCTACACCACTATCTGTTGGTAGAATGGCAGAACTGATAGACTGATCA
GGAGACTCTTCAGCATCACCTAGACCCTCTGCTTCTTCTGACTCTGGCTCCTTTATCATA
GAATCTAGTTGATTGTCTTGATCATTTTGGGGCGAATTCTCTTCAGTATCTGCAGGTGTA
GAAAGACAATTATCTCCGATATACGCTGATTCCTCGTTCATAGCACCTGAAGCAGTTTCA
TCTATGTCCATTTCATCTTCAGCATCTGCATTACCTTGTTCAACTACAGGATGCTCTTCC
TGAGCAGGAGGTGCAATAGAAGGCTCTACGTCCAAAACATCGCTGCTGCTAGTTGGACCA
CCATTCGCAGCAAGTTCCTCAGGCTCAGTGGTCACATCGTCACTTGCTGAATTATTGTCA
GGCAAATCATCGATAGTATCGGCAACCTGGTTATCCTGGTTATCGGCTTGAGGCGACACT
TCCGCGCCATCGTGAGAATCGCTGTGAGTAGCAGGGTCCGATTCCATTTTCGTGATCTAA
CAGCGTACAAACTGTATAGTTTTGACACATCGCCTTTTTTCACCGAGTT
(2629 bp)

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