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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12275_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_transducin_beta-like_protein_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:6.75 TPM:6.79
ORF EntryO_BomoSK10615_complete:A_BomoSK_comp12275_c0_seq1
Sequence
(Nucleotide)
GCCTTTCCAGTTGGAAAAATAAAATAACGAAGCATGGTTTTGTTTAGCTCTTTTACTTGT
ACTATGCGTTTCTAAAGAAGTTGAAGATTTGGTTTTGATTTTGAGCTCTTATTTAGGCTT
GCTAAGGATAATATGATCGTTAAAATATATTCTTTGCTTTGATTTTTTTGTTTTACTAAA
ACAGTAATCCAGAGCAATGTCAAATTTAAAAGAAATATATGAGAAAAGTGCAGAGTTTAC
TGCATTTTATACAGGTGGTGATATACAGTGGACAAATGATGGCTTACAAATGCTTTGCCT
ATGTGATGAAGCTATTAAGGTGGTTGAAGTCGACACTCTAATCACTTCTCTTATTATTGG
CGAAACTGAGGAAGATGCAGAAAATGACCAGATTTATACATTTAAAATATCACATAGTAA
TCAAAGTATTGTTACTGCACACAAAAGTGGCCTAATTAAAATGTGGGACAAAGAAACTGG
AGTCCAACTAAAAATTTGGAGATCAAGCCATAAAGGACCTGTTGTGAAGTTAGCCTTTGA
TTCAACAGATGAAAATATTGCTTCAGGAGGTTCCGACGGTAATGTGAGACTGTGGGATGT
AGGACATAATACCTGTACTAGCAGTCTTCGTGGAGCTATGGGTGTTTTCTCTGTGTTAGA
GTATCATCCAGATTCTTCTAAACAATTAGTATTTGGAGCAGCAGATGATACAAAGATTAG
ATCCTGGTGTTCTAAAACTGGTAAAGAGCAATTAGTATATTCAGGTCATTTTAGTAAGGT
AACTGCTTTGCTATTCACACTTGATGGTAAATACATGGTCAGCTCTGGGAGGGACAGAGT
ACTCATATTGTGGGATTTAAATGTTAGCAAAGCTCTTAAAGTTGTTCCTGTGTATGAAGG
AATTGAATCCTGCATTCTCTTACCACCTTCATTTAAAATCCCAAATTTTAATAAAAAGCT
GGAAACTGAAGGGGTTTATGTTGCTTGTGCTGGAGAAAAAGGAATTGTTAAAGTATGGAA
TTTGTCAATGAGCCGACTCATGTTTGAACAAATCAATAGTTTAGTATCCCCGTCAACTGA
AGAAGGAGGGCTGTCAATAACGCACCTACTATATAATCAAGCAAGAAATATGGTCTCTGT
AGTGACAGTTGATCATAACATTATAATACATGACCTAGAAACATTTGACTCTGTGAAACA
GATGATTGGTTTCACTGATGAAGTTCTTGACATAATATTTTTGGGAAAAAACGAGAACCA
TATAATTGTTGCCACAAATAGCCAAGATCTGAAGTATTATGATTTAGAAACTATGAATTG
TCAAATTGTTAAAGGTCACACAGATATAGTGCTCTCCTTAGCAAACTTTCCAACTAAACT
TGAAATGTTTGTTTCATCAAGTAAAGACAATAGCGTTCGATTGTGGCTTCAAACACCAAA
CAACACTATTCATTGCCTTGCAGTTGGAACTCGCCATACTGCTTCTGTTGGGTCTGTTTA
CACTTCACAAACATCCGATGATTTCTTTACCTCGGTTAGTCAAGATAATTGCATAAAAGT
TTGGACTGTATGTAAGCCTGCAGAAAAATGTGTAGAACAAAATCTTAAATGTAGTCACAC
TGAATTAGCTCACCAAATGGACATTAATTGTGTTGCAGTATCACCCAATGATAAAATGAT
AGCTACTGGTTCACAAGATAAAACTGCAAAGATTTGGGCAGAAGACTTGACACTGTTAGG
TGTATTAAAAGGTCACAGAAGGGGAGTGTGGTGTGTAAGATTTTCTCCTGTCGATCAAGT
AGTGCTAACATCTTCAGCTGACAGTTCCATTAAATTATGGTCCATAAGTGATTTAAGTTG
CCTAAAAACTTTCGAAGGTCATGAAAGTTCTGTTCTGAAAGTTGAGTTCATTAGTAAAGG
CCAACAGATTTTATCCAGTGGAGCTGATGGATTATTAAAGTTATGGACTATCAAAACATC
AGAAAGTAAAATGTCATTAGACAACCATGATGGTAAAGTGTGGTCATTAGCTATATCCAA
AAATGAATCATACATAATCACAGGTGGTTCTGATTCAAAATTAGTGAAATTAAAAGATGT
AACATTGGAACAAAGAGAAAGAAGGACCAAGGAGAGAGAAGCACTGATTTTGCAAGAACA
GGAATTAAATAACTTACTTCATGACAAAAAATTACTCAAAGCTTTAAAATTAGCATTACG
AATGGACAGGCCACTGCACGTGTTAAAAATAGTGAATGAAGTTCTGAAAGGTGGAAGTGA
AAAGCTTAGAGAAACATTAAGCGATATTAGCCACACGCAAAAAGAAACGTTACTAAATTT
GCAGTAGAATGGAATACAAACAATAAAAATTGTCACGCTGCTCAACTTGTCTTTAATATA
TTAGCTCCGGAAATTATTTCAGGTAATCTAAAAGTGCCTTCTTTGGCTAATTTCATAGAG
GGCGCTTTACCATATACCGAGAGACATTTTGAGCGCCTAACGAATCTTCTTCAAGATTTA
AATTTCATTACCTACACTGTAAATTGTATGCAACCTCATTCTGTTATTAAATTTAAGTAA
GTGTTATAAGATATTACGAATTATTATGAA
(2610 bp)

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