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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12249_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX54_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0030331 F estrogen receptor binding
GO:0044822 F RNA binding
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:0.66 TPM:0.67
ORF EntryO_BomoSK10577_complete:A_BomoSK_comp12249_c0_seq1
Sequence
(Nucleotide)
GTCAAATTGTTAGGTTATTAAATATTGAGTGTTTCGCGTGTTAGTACTAATATTATTACT
ATAGGCAGCATGGTTAAATTAAGCTAATAAAAATGTTAAAACCTAAAGAATTAGATGATC
ATCTGCCGGGTTTCGATGCCCCTAAAGCAGATGAGCCTCAAAATGAACCCAAAAACAACC
AGAAGAAAAAGAAGAGTTCGGGTGCTTTTCAATCAATGGGCCTAAGTTTTCCTGTTTTAA
AAGGAATCACGAAACGGGGTTACAAACAACCAACACCTATACAACGTAAGACCATACCAA
TAGCATTGACCGGGAAAGATGTTGTTGCAATGGCCCGAACTGGGTCCGGAAAAACAGCTT
GTTTTGTCCTCCCTATCCTTGAGAAACTTCTTGTTCCGAACAACAAACCTACACCTGGAA
AGAATTTGAGGGCATTAATTCTCTCACCAACTAGAGAACTCGCATTACAGGTAAACTTTA
GATTTACTGGAATAGATTAATTTTTTACTAAAATCAGATAAACAACAAAATACCTTAAAT
AGCTTTTTTTTATCTCATGCATATAAAAGTAATTAAGAAACTCTTAGTAATTAAATTTTA
TAACTAGAATTGAAATGATACAGACATTAAGATTTGTGAGGGAGCTAGGAAAATTCACTG
GATTAACGAGTGCAGCTATTCTTGGTGGAGAGTCCATTGAGCAGCAGTTTAATGTGATGT
CTGGCTCTTCTCCAGACATAGTTGTTGCAACACCTGGGCGCTTCTTACACATCTGCATTG
AGATGTGCTTAAAGTTAGACAACATCAAAATAGTTGTTTTTGATGAAGCTGACCGACTAT
TTGAGCTTGGTTTCGGTGAGCAATTACAAGAGATCTGTGCTCGTCTCCCTTCTAGTCGTC
AAACGTTATTATTCTCTGCAACACTACCTAAAATGCTAGTAGAATTTGCGAGGGCTGGAC
TATCAGATCCCACCTTGATAAGATTAGATGTTGATTGGAAATTACCTTCAACATTATGGC
TGGGATGGATATCAGTTAGGGCTGAATTGAAAACGGCAGCCCTGTTGATTCTATTAGACA
AAGTATTAACTCCAACAACACCCCAAGCAGTTGTCTTTGCTGCTACGAAACATCATGTTG
AGTATTTACATTTGATTCTACAACAAGCCGGTATAAGTTCAACATATGCGTATTCAGGCC
TTGATCCGTCAGCCCGTAAGATAGCTCTAGGACGGTTTACCAATAAGAAGTGTTCTGTTC
TAATAGTAACGGATGTGGCAGCCAGAGGTCTAGACTTACCTGCATTGGATACAGTCATTA
ATTACAACTTTCCGGCGAAACCCAAACTCTTCGTCCACAGAGTTGGTCGCAGTGCCAGAG
CGGGTCGAGCGGGTCGGGCCTTCTCCCTGGTGGCTGCGGAAGACGTGGCCCACTTGTTGG
ATCTGCAGCTGTTCTTGGGCACCACGCTGGGGAGAGTGGACGAGAGCGCGGGGCGGGGGG
CCGCCTGCGCCAGCGGAGTGTGGGGGGCGTTGCCCGCAGAACAGCTGGAACTTCGACATC
AGGACGTTATGGCCTGGGAGAAGAACTACTCTGAAATTGAGGAGGCGGCTCGTACGTGCG
CCCGTGGACTGCAGCAGTACGTGCGGTGGCGCGAGGCGGCCTCCGCGGAGGGCAACAGGC
GCGCCAAGCTGACCGAAGCGCCCACGCAGCCGCACCCCTTCCTCACCGACGGCGCCCCGG
ACTCCGCCGCGGTACTCGTGGATCAGATCAAGAACTACACACCTAAAGGGACAATATTGG
AGTTGTCGGCTAAAAACGATTCACCGATGTATTTAGCGATGAAAGCCAAGAAGCTCGCAC
ACGGCAGAACTGTCGAGAAGACGAGACAAAACAAAAAGCTACAGGCCGAAGGTAAACTTG
ATGATATCGTTACTGCCGTTAAATCTAAGAAGAAAAAGAAGGGACCAGTGCGAGATGAGA
ACTACATACCGCATCAAGCAAGCGACCAGCACACTGAAACAGGCATGGCGGTGAACTTCA
GCGCGGGCGCGGAGCACGCCCAGCTGGAGCTGCGAGCCGACAGCGGGGACGCCGAGCGCG
CGCAGCGGAACGTCATGCGCTGGGACAGGAAGCGGAAGAAGATGGTGCACGTTGACCCCG
ACGGCGGACGCAAGATGATTCGTACTGAGAGCGGGTTCCGGGTCCCGGCTTCGTTCCGCA
GCGGCCGCTTCGACGACTGGAAAAAACGCAACCTCGCGCACGACCACTCCGACGACGAAC
CGCAAGCACAAACAAATAAAAGGAAACCAGCGTCGGAGTTCCGTCCGCACTGGGTGAAGC
ACAACGAACGCGTAGCGAAAAAAGCGGCCGAGTCCAAGTCGCGCGAGTTCAGAGACAAGC
AGCAGATCGTCAAGGAGCGCATGCGGAAGGACAAGATTAAACAGAAACTCAAGTTCAAAG
GGAACAAGAAGAAAAACAAAAGGAAAAAATAAGTGAATTATTTTGAATAAAACGTTTACG
(2520 bp)

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