SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12240_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_structural_maintenance_of_chromosomes_protein_1A_[Amyelois_transitella]
Ontology
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000794 C condensed nuclear chromosome
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007062 P sister chromatid cohesion
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0008280 C cohesin complex
GO:0009314 P response to radiation
GO:0016925 P protein sumoylation
GO:0019827 P stem cell population maintenance
GO:0030893 C meiotic cohesin complex
GO:0032876 P negative regulation of DNA endoreduplication
GO:0036033 F mediator complex binding
GO:0042770 P signal transduction in response to DNA damage
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
Transcript
Level		FPKM:10.68 TPM:10.74
ORF EntryO_BomoSK10532_complete:A_BomoSK_comp12240_c0_seq1
Sequence
(Nucleotide)
AATAATTGTAAGGTAGCGCCCTCCGGCGCGCTGCTTGGCCTCCGCCTGGCGCCCGCCCTC
CAGCTCGTCCTCGGCGTCCTGCACCGCGCGCTCCCACCGCGTCACGTTCTTCTGCGTGTC
CCGGGATCGCTCGAACTCCAGGTTGGAGGCGACCCTGTCGATTTGCGCTTCAAACTCCAT
CCGCCGCTTGGCGCGCTCCTGCTGGGCGCGCAGCTCGCGCTCCTCGTACTGTCGGATGTT
GGCGACGCCGATGTCCCGACAGAACGCCTTGAACACGACGTCCTCCACGTTGTTCATGTT
CTCCTTCACCTCCTGGATCTTGGCGTCGCGCAGCCGGATGGTGCGCTCGATCTCCTCGAT
CTGAGGCCCAAAAGTTTCCATCTTTCTCTCCAGCTCAACGATCTCAGCATCCAACGTCTT
AATTTGTTTTAAGGTGGTGTCCCTGTCGGTGACGGCGTACTTGAGTCTGGACTCGAGCCC
CCGGATCTGCGAGTCTACGGTGGTCAGCTCCGACTCCTTGCGGGACTTCTTCATCGACTC
CCGGAGCTCTTCTGTTAGCTTCTCCTTTTTAGCTTTAAGCTGTGAAAGATGCTTCTCGTC
CCATCGTTTAGCTTTCCTCGCCAGATCCAACGAGCCCCCCGATATGATGCCAGACTTCTG
GTAGAACGTGCCGTCCAGCGCCAGCGCATCGTATCTGCTGTTCTTGTTCCGGTCGAGGTC
GTAGGCGACGCGCGACGCGTCCTCGGGGGTCTCGCACACGAGCGCGTTGTTGGTGACGAA
GAGCACGGCGCGGTGGATGGCGGCCGGCTCGAAGCGGAGCACGTCGAACAGCAGCTTCAC
GTTCTTGGGCTCCTTTATGTCTCTCAGTCTCTCCCGCAGCGGTTTGGCCTGTATGTAGTC
CAGGGGGAGGAAAGTCTCCGGTTCCAGCATTCTTTCTTTCAGCACCTGGATACACCTCCG
GGCTGTCTTCTCGGTGTCCACCACGATAGCTTCCATGTACTTCCCGAGGACCTTGGTGAT
GGCCACGTTGTACCTTTTGTGGGTCGGCTGGCACATGTTGATCATTCTGTCGTAAACCCC
GGGGATGTCTCGCTTGAAGCTCTCGACGATCTCCTGCTTCTTCCTGCGGCGCGCCTCCTC
GTGCTTGTCCACGCGCGCGTCGCCCAGCTGCGCCGCCACGTCCTCCAGCTGCGTCTGCAG
GCTGGCGGCCCGCCCGCGGCACGAACCCACGTCCGCCTGTAATTCAGCTCGTAGTCTCCT
CTGTTCCTCAAGGGCCTGTTCCGAACTCTTGATGTGTTCATTTAGTTTGTCCACTCTCTT
CACAGCTTCGTTTCTCTCGTGCCCCTTCTGCCGATGCTTGTTTTCCAGCTCTCCCTTCTT
CCTCAGCTCATTGTCCAGACGATCCTGGTCTGCCTTCTGTTCCCTATTCACGGAATCCAG
TTCCTGGAGGTAGCGAGCTGCCTGACGGGATGCTTCCATCTTCAGCTCTTCATATTCACG
GATCTGGGCCTCCTCCAAATGTACATCAGCCTTCCCACTGTGACCGGTACCACTAGCTGT
TTCCCATGTTGCCTTTTGCTGCTCCAAGGTTCTAAGCTCCTCCTCCAAAGTCCTGATGTC
ATCCTGATGGGCCTCATGAGCTTTCCGCGCTTGTTCTAATGTCTTTTGAGCACTTTCAAG
CTTCTTCTGGGTGTGAGTGACTCGTTCTTTTGCTTTTATGAAAGTTGGTCGTTTTTTTGA
AATCTCTGCTTCCACTTCCCTAATGTCCTGTTCAATCTTTGCGAGCTCTCTCTGTACGGT
TCCGGCTTCTTTTTTCTTTTCCTTTAATGCTTCTTCAGCCTTCTGTCTTTTCTTCTCAAT
TTTTGCTAATTCTTGTTGTTTGTGTTGCAAATCTTCTTCATAAGCCTGGATCTCTCTCTC
GTTGTGATACAGATGGAAAAGTTGAAGTTCCACTTTTTGCTCTTGCAATTCTTGCTTAAG
TCTTGTGTATTTCTCCGCTTCTTCCTTCTCAAACTTTGCTTCTTTCCTCTCAGCTGCCAC
TCCCTTCTTTTTCTGATAGGAGAATTGAGCCTCCTCATCAGCTCGGTTTACTTCAGCACG
GCAAGCTTCATACTGTTCCTTTAACACTCCAGACCCGCTGATCTCCTCAAACAGAGTAGT
CCTTTCTTTAGGATTCTTCATGGCAATGCTCTCGACGGCACCCTGGAAGACTAGGAAGTT
CTTGGCTTTCACATTGATGCCCAATTTCTCTAGTTCACCAAGATAGTTACTTACTGATAC
AGACTGGCCATCAATTTTATGTTCAGACGATTGTCCAATCACTGATCTCTGGAAATGTTT
CTCAGTCATGTCTTCCAGAACAAACGTTGCCGTAACAGATGCACTTCGAGAAACAGGTTT
GTTGATTGAAGCACCATGGATCAAGTCACTCAACCTCTTCACACGCAACAATGATGTCTT
CTCACCCATCACAAAGCTCACAGCGTCCATGAAGTTGGACTTTCCTGATCCATTAGGGCC
AACAACAGCGGTAAAAGACTTCAGAGGACCTATGCGGTGATGTCCTCTATAGGTCTTGAA
ATTTTCCATATCGATATATTTAAGAAACGCAGGCATCTTGATTAAGACTAACTCCCATGC
AATACTGTAATGCTTTTAATTCACAACACAAATTAACAAGCGCCAAACATAATCACGAAT
TGTTTGTACAAATGTCAAAGTGAAACACCGGCAGAATTGTTCAATACATCATCGA
(2755 bp)

- SilkBase 1999-2023 -