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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12239_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:4.21 TPM:4.23
ORF EntryO_BomoSK10527_5prime_partial:A_BomoSK_comp12239_c0_seq1
Sequence
(Nucleotide)
AATTCATACAATCGTCTCGAATTCAGTATATTAATCCTTTCCCTATATAATTTATCTATT
ACTTACAATACAATTGGTGACTTCTCGAGAAATCAAAGAAACGTTATACAAATTTGGATT
TTTGCTTGTGTCTGCGTTCTTCATCTCGTTATGATCATTAGAATATTATGGCTTCTACTA
CTGGTGATTGTTTCAGTAAGCCCCTGGACATTAGGTAACCCAATATTCCTACAGAAGCCT
GGTAAGCCAAACAGACCTGTGATAAAATGGAATCCTCCAACGGACACGTGGAACTGGACT
ACGAATCCCCGAAACGAGGAACCGTTTTTTGTACCGTCAAATTTTACGCATAAATTGCCA
CCATCGGCCAATGAAACCGAACTCATAGCTCACATGGCAGCTTTGAAACGTAACTATTCG
CGGCTCCTCTGGGATAACGATAAAGGCACGAATTTACCTATGTTCGTTGAAAAAGCATTA
AAACTACTCAACTTGAAACAGGTTTATTACGAAGTTGAGCATTCGGTGATGTCCAAAGTG
TCGTGCACCGCGTGTAAGGCAGGCGCAGGACTGCTGCAGCACTATATAAGGCTCGGTAAA
AGTAAAGATGAGATCAACAAAATGATTTTTCAATTTTGCGTTTCTTTAAAGATTCAATCC
GCTCGAGTTTGTGAAGGAATAACGAGATTATTCGGGAGCGAAGTGGTATATGTTTTGAAA
AGAATAACAATTGGCCCGGACGAAATATGCAGTTTTGTGATTGGTGACGCTTGTGGCGAT
GTTTATAATCCATATCACGAATGGGAAGTGGCTTTCCCTCCGGTGCCCAAGCCGACTGTG
CGACCTCTCGAATCACCGTTAGAAAAGGCACCCACATTCAAAGTATTGCAGATTTCAGAT
ACGCATTTCGATCCTTATTATGCAGAAGGTGCTAATGCCGAGTGTAATGAACCACTTTGT
TGTCGTGCGTCTAACGGACCCGCTCTGACCCCGGGTGGCGGAGCAGGACGTTGGGGAGAC
TATAGAAAATGTGACACACCGAAGCGCACTATTGATCACATGTTGAAGCACATTGCTGAC
ACACATACAGACATAGACTATATATTGTGGACCGGAGATTTACCACCACATGACGTTTGG
AATCAAACGAAGGAAGAAAATCTCAAAGTTTTACAAGAGACTGTTGCACAAATGTCAGAT
ATGTTTCCTGGAGTACCAATTTTCCCAGCTCTAGGAAATCACGAATCTTCTCCGGTAAAT
AGTTTTCCACCGCCCTACATATCTTCGCCGGACCAAAACATCGCTTGGCTATATGACGAA
CTTGACACGCAATGGCGACGTTGGCTTCCTGCTGGCGTGTCGCACACCGTACGCCGGGGC
GCATTCTACTCGGTACTAGTGAGGCCTGGCTTCCGTATAATATCGCTTAACATGAACTAC
TGCAATAATAAAAACTGGTGGCTATTGATGAACAGCACAGACCCCGCCACGGAGCTGCAG
TGGCTGATTTACGAATTGCAGTCGGCAGAGTTCAGCGCAGAAAAAGTCCACATCATAGGT
CACATACCCCCCGGACATTCCGATTGTTTGAAAGTGTGGAGTCGAAATTACTACGCGATC
ATTAACCGATACGAATTAACGATAACGGCTCAATTTTTCGGACATACACATTTTGATGAG
TTTGAAGTATTCTATGATCCAAATGACCTCGGTAGAGCAACAAGTATAGCATACGTTGGG
CCTTCTGTATCACCATATTACGATTTAAATTTGGGATACAGAATCTACTATGTAGACGGT
GACCACGAGGATACTACTAGGCAAGTGGTTGACCACGAAACGTGGATTATGAATTTGAAA
GAAGCAAATCTGTTTGGATATCCGATATGGTATAAGTTGTACTCGGCCAGGTCTGCGTAC
CTGATGCCGGCGTTGCGACCGCAAGACTGGGACAAGTTTATTGACGACATGACCGCGAAA
GAAGAAGTTTTCAATTTGTATTACAAACACTATTGGAAGAACAGTCCCCGCAGAGGTATG
TGCGACAGTGAATGTCGTAAGCGATTGATTTGCGACGCGCGGTCGGGACGATCACACGAC
CGAAGGGCCCTCTGCGTGCACATCGAAGCACGCATCGACGGCGCCGCACCCACTCCACAG
ACTTGGAGAGCTTGGCTATATAATGGCTTTTTTGTTTTAGATGAAACTAGCGGAGAACAA
GTATAATGG
(2229 bp)

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