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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12218_c0_seq2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine-rich_splicing_factor_1A_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:16.70 TPM:16.80
ORF EntryO_BomoSK10490_complete:A_BomoSK_comp12218_c0_seq2
Sequence
(Nucleotide)
TTCCAGTGATTTATTAAGTCCATCAAACTGTGGTTGGTCTTTGGAATGCAGATCCAATAA
CTAAATTACATTATAAACCAAAATAATCATTAAACCTATATATATGTAAGACCAGACAAA
GGCATTATTACACAATTCCGTTGCCGTATCAATCATTCCGACCTCCCAGGCGTCCAACTC
TCTCACGTCCGCAGCACAGAAGCGTGTGTCAGAGGGTCCGCCGCCGCCGACGGGGCGTCG
AGGTGAAAGCAAATAAAGTGAGTGAAGGATTCAAACATCATGTAGGTCGGTACGTTCGCG
TGCACTCAACATAACTTATTTTGGCAAGGAATCATAACGTCATACCCGGCGCGTCCAGCG
GTCCTGATCCGTCCAGTGCGACACACAGGCCCCCGGTCGTGTCCTACAGCCCGCGACACT
AACATCCGTGTTCCGATCCTGACTCACACCTCCAACGATCCCATCCAAGCACATCCAACG
ATCCAAAGTCGATGAAACAAAAGAAAATTACTTTAATTATACATGTCAAACCTTCTGTCT
TATTATACATTACTACGGTGTCAGTGTCAACAACGCTGTGCCTCGTGGACTATTTTTTTT
TATTTTACAATTTTAATAAAAAATCACCTTTACAATGAAATATTTAAAAGAGATATTAAT
ATATGGATGGAATCGTGAAAGATTATATTGAAAATGTATAATGGTTTCCATCAGAGTGGT
TCAGTCGCAAACTCGCGGGTGTTTGCTCTAATATCTAATACATTACAATTTTGAGACCAT
CACCAATTCATAAAATAAATTTTTAAAATTAAAACAGTCAACGAAACAAAGTATTGAAAG
GCACGTTCAAAAGCAAAAATTCCTAAACAATAGTCTTTGTGAAATATATTTTTAAACAAG
TCATGAGTTTCTACTGTGAAGTTTCAAAATCGTCAATGTCAATATTCTGATTATTGACAC
ATTTTTTATAAAAAAATTGTATTGTTAACTCATCATCCAATTAGTAGAATTTAGAGAATG
CTTTGGATAAAACTTGTTTTGAGATTTTAAAAAAACAAAAGCAAATTATAAATAAAGATT
CAAAATTGTCTAACAAAACAAAAAATTGGAGGTTTTTGGATTTAAACAGAACAAACACCT
TTGTGTGAATTAAAGACGATACAAATACACAACTAACTGTTGGTCAAATATAAAATTGCT
TACAACTTTGGAAAATTGAAGTATCCCTTTAATTTTGTCCATATCCAATTTAGCATGAGT
ATTACATTTTCATTACTTAAAATTCATTTCATCCCTATGCATCTGAATCTATTATACTTT
ACATTTTCATAAATAAATTAAAAAATATTATGTCTCAAGTCTTGTTTGAACAAAAACATG
GTCCTAAGGTTTGTAGCCTCACTGTACAAGTGAACTCGCGTAATATTAGCTCATACCCTA
CAGTTAGTTATCAATTCCCAATTTAATAATCATTGCACAATTTGTAGGACATTACAGTAT
GAAAAGCAGTACCGACGAAATTCATCTCAAAACAGTCTCCAAAGATACAGTGAGAGCTAA
CATGTAATTTTTGCATTTGAACGTGAATGTTTGTTTGTATACAAGTGGGAGGGCTTATGA
ACTACAAACAGCTGGGAGTCGCGGCGGCACCGGGGGCGATGACCTCTCGGCGCGTGTCAC
TGACCTCTACGGCTGCACACAAACACACAGAATTGTTCATCTTCTTCATTTTTTTAAATT
TTAAATTTATTATGTTTTATTATTTTATTATGAACACCAGTAATTTATTATGCACATATG
TTGGGTAACAAGTCAGTTCACTGTGTGTCTGTCTTTATACAACCCGCACTTAGCAATCCT
TTTAAAGAGAAAAGTACCCTCACTAATACACAACAAAATCTATTTTTAATATCATTATCT
ATCTTTTATTTATAACAGTACATTATTGTCTTGAACAGTTTGTCGTAGTTATACTACTTT
TGATGCACTGAAACGGTCTGGAGAATTCGCACATAATAGATAGTGTGACGTTAGTAGATA
AAATTACATTAGAAGTGAAATTAGTACTAGAGAACTCAACAAAATTGTTAGATCTAAATT
TATTTTCTGTTTTTTTTTTAGTTTTTTATTTTAGTTTTAGCATAAAAGTTATGTTTTGAG
ATTCCTTTTGTGTATATATCGCCATTTCCCATTTTGGGTTCCTAGAGTAATTGGCATAGT
GGATTATTTTTAAAATCTGTTATAGTGGGATCTTGTCTGTCATAGGCTGTGAAAATATGT
CGTTTTTTTTTAAATTCAGTATGTTTTTATGAACACAGCTACAATATAAAAACAATCATT
TCAACTTGATGACATCATTAGATGATAGAACCACTTATTATTTAAAATGAAGTTCTGATA
ATCATTAAAGTCAGTTGCTTAGTTCACATTTGCTGTCCAGTAGATTTAAAAAACTACTTA
ATTATTAGGTAAATGTTCAATTTCAATGTCTCTAAATTATAGAAAACATTTGTACTTACC
GATTGATTTTGACAAACCAACAATGTCGGTAAACATATGGTGTGCATTAATTGTAATCAA
ATGTTAATTGTGCTTAATGTTCATCTTTATAATGTTTACATTTTATGAAAATCTGTATCC
TTAGGGTATCCCTGCACGGCCATGCTGACCAGATTATGATTCCTACTTTCGCTAGTTATC
TATAAGACTAAATTTATCCAAGTCCATTAAGTTTTTATTAATAGAATGGTAGTTTTATCC
ACTGATAAATAATCCATGTTTCTAACAATGTATGAACATTATAGAGAACCTACCAAATGT
GAACAGCAATGTTTAATTAGATATAATCTCATAAGAGTACAGTACCTTGTGGGAGTCAGT
AGTTATGTGACCGCGAACGGGAGCGTGAGCGCGAGCGCGAGTAGGAGCGTCGCACCGGGG
AGTAGGTTGGGGTGCCACGACGCCGCGGGGAGTATGACCGAGACCTGTCACCGCCGCCGC
CACCACCGCCACCGCCGCCACCGCCATAGTCTTCCTTCACACGTATATATGTCACCTCAC
CCTCATGACTCCTAAATCTAGAATCATCTAACTTTTTAACAGCATACTTCATATCTTCAT
GCCTCAAAAATTCCACAACACCAGATCCATCTTTAAAGGTGTCTGCAAAGCATACGTCGC
CGGCCTCTCGCATATGGTCTTTGAGGTCCTGCCAGGAACCCGAGGGCGGTAAGCCGGTAA
CGAGCACGCGGTATTCAGAGCGTCGAGCGGGCGGACCACGTGCTGCCCCTCGTCCACCCC
AACGGTCACCACCGCCTCGAGAACCACGAGAGCCTCCACCTCCACCTCCACGAGGGAACT
CGACTCGAAGACGGTACCCATCATAGTCGTAACCATCCCTGGCTCTTACTGCATCATCTG
CATCTCTGGGATCCTCAAATTCCACGAACGCGAATGGCGGACCTTTTCTGTTCTTTAGGT
CAACGAACGTTACTTTTCCGAACTTGTAAAACAAGTCTTGAATATCCTTTGTCCTTATGT
CCGGTGGTAAGTTTCCAACATATATACGACACTCATTTCTGTTGCTACTGCTTCCACCCG
ACATTATAGCTAAAGAATATTACTATTGCTTAAACGTTTACTTATTATTATGTTGGCTTC
ATCGACTAATTTCACCAATCCGACGCTTTACTGTGTGTAATTGAAAGTCGGGCAATATGG
CGTCAAATGTCAATGTTCCGATTTTGGATCACGGTGGA
(3758 bp)

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