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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12202_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF19B-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044194 C cytolytic granule
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:11.34 TPM:11.40
ORF EntryO_BomoSK10457_5prime_partial:A_BomoSK_comp12202_c0_seq1
Sequence
(Nucleotide)
GAGTATCTCACTAGATACTGATGACACATTTTATGTAGCTACTTAATCTGTGCACCCCAG
TAAAGTCCTAAAGTTAGACGAAAGTTCAAACTGTAAGTTATTGGTAGTCTGTGAGTTGCT
GTAGAGTGAAGTAGGTACCTACCTACCTAAGTGTTAGGGCTCATGTCAGACAAACCCGGT
TTTACTTGTTAAAATTTTGTTCACAATGTCTATTTTGATCAAACAGTGCTGGATTTTTTA
TTTTAAAAGTATCGTCATTAGTCGTTGAAACCGTGGCAATAATCTTATTTAGTCCTATGT
GTTCGTGCATAATGGGAGTTGACTGATTCCTCCCCACCGGAGAGTGCATCAAAATTCACA
TCACGGACGCTGCACAAACTAGCTTCTCAATATCTGAACTTTCTCTAGTTCATGCTTTGT
GGGACTGTTACTCAACACGTTGTTGTGCAAAGATAATTTTGCAAGCTGATGATCACAAAC
GACCAGACGAGACGACCTAGACGCTGCTGTCGTTAGTGTGTGAATAGTGCGAGTCGAGGA
CAGTAGTGCGTCGATTGGATGCGTCTTCGTGTGTAATGTGTATTGTTTTATTGTGATGGT
TGAACGCGAAGGATCTCGTCGCGGAAGCGGCAGTGGCGGTGGCGGAGGCTGCGGCTGGGG
CAGCGGCGTGCTCCGACGGCTGTCGTTGCGAACCTTATTGCTCGATAGCCCCCTCGTGGG
AAGAAGGCTCGCACATTCCGTGTTGGATCAAGGCGAAGCTAGGCCAGTTAAAGTGAGCGG
CGTCGAACAATCACACAGCAGGCAGCAAACAACAATAGAATACATACCCGAAGATGAAGA
GGGTGACTTGCTCGAGTGTCCGCTGTGCTTGTCGACGTTGAACGCGAGCGCGACGGTACG
GCTGGCGTGGTGCTCCCACCGCTGCTGCGAGCCGTGTCTGCGGCAATACCTGAATATCGA
GATATATGAAGCCAGGGTGCCGGTCAGCTGTCCCGTCTGCCACGAGAGTATACACCCTTC
AGATGTACGTCACATCGTGGACAATCCAGTTTTATTTGAAAAATATGAAGAATTCTCAGT
GAGGCGCGCTCTGGCGGCCGACCCAGACACGCGATGGTGTCCAGCACCCGATTGCAGTTT
CGCTGTAGTGGCAACAGGTTGCGCTTCGTGTCCGAAGCTGACCTGCCTGGCGCCCGGCTG
CGGGGCGTCCTTCTGTTACCACTGCAAGGCGGCGTGGCATCCTACCCAGACCTGCGACGC
GGCTAGACGCAGTCGGCAGCCTCCCCCCAGAGCGCCGCCGCCGACACACCCCGATATTGA
CCAGGGAGAAGTGAAGCCGTGTCCCCGTTGCTCGGTGCTGATCGTGAAGGTGGAGGACGG
CTCTTGCAACCACATGGTCTGCTGCGTGTGCGGCGCCGAGTTCTGTTGGCTCTGCATGAA
GGAGGTCTCGGACTTGCATTATCTCAGTCCGAGCGGCTGCACGTTTTGGGGCAAAAAACC
GTGGTCCCGGAAGAAGAAGTTGCTGTGGCAGCTCGGGACGCTGGCGGGCGCGCCGCTCGG
CATCACGG
(1568 bp)

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