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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12198_c0_seq5
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
Transcript
Level		FPKM:5.03 TPM:5.06
ORF EntryO_BomoSK10446_5prime_partial:A_BomoSK_comp12198_c0_seq5
Sequence
(Nucleotide)
TAAATTTTTTTTTTTTTTTTTTATATGTAGCTGTTAAGTTAACAATACATGTTTTAGGCA
GGCAGTGGCAAGTTGTAAGCAGCAATTAGTCTAGCCCAGCGGTCGGGGAACTTTTTAAAT
TATCACACCAAAATATTATAGCCCCCATGATAATTTTGAAAAGAAAACAATAACTAAAAA
TTTAACGATTCTAAAGAAGTTTCACTTTAAAAATGTACAAAATATTGTTACATTTCTACA
TTTCGTTTAATTCACGTCCTCAAATTCGCTTTAGCTTTCTCTAAAATCTCCTTCTTGATC
TTCGGATAGTCGGGATGCACCTTCAGTATGTATCGCGATACGATTATACATTCCGGGTAC
TTCTTGAGTTTCAAATAACAATGCGCCAGCTTGTAGCCGACGGACAGGTCGCCGCGGCCG
GCGTGGCTCCACGCGTTGTCGTAGTTGTGCGCCGCGCTCTTGTAATTCTGCTCCTTCTCC
GCTATTTGACCTAGATATTGGTAGGCTCTAGCACAAGAGTTGTTGTGGTTTAAGATTTTC
GTGAGCAGTTCTTTGGCAGCGTCCGTCCTTCCGGAACTTATCTGTCCCTCAGCCACTTCC
AGCCAGCATCTTTCGAGTCCATCGGCCTTCTCCGGCGACCACACGATGGACGAAATAGTT
CTTTTGAGGATGTTCTTCGCGCGCGTCGGCTGTTTTGTTATATTGTATGCATTAGCGATG
GCCAGCACGACGTAAGGGTCGTCCTGGTAGCCGTCCTCGGTGACCAGGGGTAGCAAGTCT
TGCAGCACCCGCTCCGCCTGGCCCTTGTTCTTGGTCGCCAGCTGGAGGAGCGCCTGCAGA
GGTTTCCGTTCAGCTGGATTCACTTCGACGAGAAGCTTTTCGGCGGTCCGTAAAGCTAGT
AGACGCGTATCAGCGTCATCAGCGGAGGCGGTGAGGTTATCCGTCGGCGGCAGCGGCGCG
TGCTGC
(966 bp)

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