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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12175_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_17_[Papilio_machaon]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000386 F second spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.50 TPM:9.55
ORF EntryO_BomoSK10382_complete:A_BomoSK_comp12175_c0_seq1
Sequence
(Nucleotide)
GAACAAATCAAACAAATACCTACCTACAACTACAAATGTTGATATGAAATAATTTAATCG
TGTTCATTTTTGTTTAAGAACATTAAAATTATTGATGAATTGTGACATCATCATCACTGT
ACATACTTCAATATAAAATTTTAATTATTAACAAAAATGCTCAATATAAAAAAATACGGC
AGTAGTTCAGAGGATGAAAGTGATGATACAGAAACAAACCAGTTCAGCAATGAAGCTCTC
TTGACCCATCTTAAGCCTGTTGATCCGAGTTTGTCCGTGGCCAAGACCATGCAAGTATGT
GCTGCTCCAGCTGTGGTGCCTACGAATGAAGATGACACTAGAGTTTTAATACCAGCAAAC
GCAAAAGAGTTAACACACAATCCAAAGTATGAGGAGCTGTTTGCACCCGCTTTCGGACCA
GAGAATCCATTTCAAACACAGCAAATGAAGGCAACGAGAAACATACTATCTGGCTATGTA
GAATTGGCACATATTAGCGATTTTCAGTTTGAGAATCAACGAAGAACATTTACGAGTTAT
GGTTATGCTGTAGATCCTTCTACAAATATTGAGGAGCAAGAAGGAGATGCTATAGTGAAA
TCTGCTATGATAGACCCTAAAGAAGATACAGAAGGCAAATCAGTTTTTGAAACAATAAAA
AAGCGACCCCTAGACAAAAAGAAGAGAACCAAAAATGACAATCCTGAAGACATTAATGGA
TTTCTAGGACCCTGGGGAGGTTTTGAAGGAGAACAGAGGATAATGAAACCGGAAGGTGAT
GAAGCAAAAGAATTAGAAGAGATTTTAGCTAAGAGACAGAAGAAAGGAAAAGTTGACGAT
GATAAACCTTTGGAAGAGAGATCTATATTACACATTGACAAGGTCACCGATTATCAGGGT
CGGTCTTGGATCGAGGCGCCCCGAAGCGAAACACAACTGCGAAGCGAGTCACCTCCCGAC
AAATGTTTCCTACCGAAGGCGCACATATTCACGTGGAAGGGTCACACGAAGGGCGTGGCG
GCGGCGCGCTGGTTCCCCTCGACGGCGCATCTCATGCTCTCCGCCGGCATGGACTGCAGG
GTCAAGATATGGGAGGTGTACGGTGACCGTCGCTGCATCAGAACGTACTTCGGGCACCGG
CAGGCCGTCCGAGACGTCAACTTCAACAATTCCGGGAAACAGTTTCTGTCGGCTGCGTAC
GACCGGTACATAAAGCTGTGGGACACGGAGTCGGGCGCGTGCGTGTCCCGGTTCACGTCC
CGGAAGGTGCCGTACTGCGCCAAGTTCCACCCGGACGCCGACAAGCAACACCTGTTCGTC
GCCGGCACCTCCGACAAGAAGATCATATGCTGGGACGTTCGGAGTGGCGAAATAGTCCAA
GAGTACGACAGGCATCTCGGTGCGGTCAACACCATCACCTTCGTCGATGAGAACAGGAGA
TTTGTGACCACATCCGACGACAAGAGTTTGCGGGTCTGGGAGTGGGACATCCCGGTGGAC
ATGAAGTACATCGCGGACCCGACGATGCACTCCCTGCCGGCCGTCACCGCCGCGCCCAAC
GGCAAGTGGCTCGCGTGCCAGTCCATGGACAACAAGGTCATCGTGTTCAGCGCGCTCAAC
CGCTTCAAGATGAACAGGAAGAAGACGTTCACCGGGCACATGGTGGCCGGGTACGCCTGC
ACCGTCGACTTCTCCCCGGACATGAGTTATTTGGTGTCGGGTGACGCGGACGGGAAATGC
TACATTTGGGATTGGAAGACGACGAAGCTTTATAAGAAGTGGAAAGCTCACGACGGAGTT
TGCATAACCTCACTGTGGCACCCACATGAGCCCAGCAAGCTGCTTACCGCGGGCTGGGAC
GGCGCCATCAAATACTGGGACTGAATAAAAC
(1891 bp)

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