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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12170_c0_seq4
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.89 TPM:0.90
ORF EntryO_BomoSK10371_5prime_partial:A_BomoSK_comp12170_c0_seq4
Sequence
(Nucleotide)
CAGGCGTGTGTGCGGGCGCGCGCGTCTCCCGCGGCCCCGACTGGAAGTGGCGCGACCAGG
ACGGGCCGCACCCCGCACTCGGCACTCTCACTTCCGAACTGCACAACGGGTGGGTCGATG
TCAGGTGGGACCACGGAGTTCGCAATTCGTATCGCATGGGTGCAGAGGGAAAGTTCGACT
TGAAAGTTGTGAGCGGTGGTACTGTCATCGAAAGTTCAAAAGCCAGCCGGAAGAGTCACT
CAACTCCCAGTTTGCCTGACGCCACTTCTGTCGATCAGGTATCAGTAGCGTCGACGGAAC
AGGCCTCGTCAGCGGACAATATATCGAGTGAAGAGATGGTCAGTAATATGTCAAGACCCC
GTACGCACGCCACAGATCTCTCTGCCATTAATAATTCGACGCATCATATAAACTCTGTGT
TTGACATAGATCTCGCGACAATAGTGGAGTCATTGACGTTGGGCGCCGAAAGTAACAATT
GCATCACCGAGTTGGGGAATACATCGTTTACCAACATGGAAATGGGACCTACGAGCATTA
CGGATATCACCAAACCTTATCCCGCCAAAGAGCCGTTACCCGAATCCAGTGCACACGAGT
GCGACGAAAATGAAGCCGGGGAAAGTCAATACGGTGATAATAAGAAGGAAAGTCAGTCCG
GTTCGGGCACCATGAGCGCTAGCGAACCTGATTTGACGCAGCAGGGCACAGGACGCCTGT
TGGAGTCGCTGGGCGTGGGCCGCGGCAACAGTGCAGGACGAGGCAGCAACGTGCCGCGCT
CGAACCGTAACAATCATTCCTCTGGTCTCCTACCTAGTTTGGTGCGTTTAGCGTTGTCGA
GCAACTTCCCCGGCGGGCTGCTGTCGGCGGCGCAGAGCTACCCCTCGCTGTCGTCCAACG
CGCAGAACGCGCTCACGCTGTCGCTCACATCCACGTCCAGCGAAAGCGAACAGGTCTCAT
TAGAAGACTTTTTGGAGTCTTGTCGTGCTCCCGCGTTGTTGACAGAGTTGGAAGATGATG
AAGACGGTGATGAGGCGCTGGACAGCGACAAAGAGAACGAACCCACTTACCAGGAGGTAG
TCAGTAAACTTTTGGTATCTCGTAATTTGCTCTCTCTGATGGAGGAAGAAGCTTTAGAGG
CTCTACGTGGCAGCTCGGGATCTGGACAAAACAATCGCTCGCGCCGACCCTGGGACGACG
ACTTCGTGCTCAAGCGACAGTTCTCAGCGCTCATACCGGCCTTCGATCCTCGCCCGGGAA
GAACGAATCTCAACCAAACTGTCGATCTCGAAATACCTCTGAACGAGGAGTCCGAAGAGG
AGGAGAGTTGGGAAGAAGTGCCAGAGAACGTCGGCGGCGGCGCGACTAGCGAGACCGGTC
GCGCCCCGGCGCTGCGCCTGGTACTGAGCGCGGGCGGGG
(1419 bp)

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